Gene Avin_51300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51300 
Symbol 
ID7763970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5212337 
End bp5213659 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID643807950 
Productmajor facilitator superfamily (MFS) permease 
Protein accessionYP_002802184 
Protein GI226947111 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACG CGACACCGGA CGACAGTCTC CATGCCGGTA CCATGGCCCG GCTCAACCTG 
AAGCTCATTC CCTTCCTGAT GCTGCTGTAT CTGATCGCCT ATATCGACAA GGCGAACATC
TCGGTGGCGG CCCTGCAGAT GAATGCCGAT CTCGGACTGA CCGCCCGGAT GTACGGCATA
GGGGTCGGGC TGTTCTTCGT GACTTATATC CTGCTGGAGG TGCCCAGCAA CCTGATCCTC
TCCCGCGTCG GTGCGCGCCG CTGGATCGCC CGCATCATGA TCACCTGGGG CTTGGTGGCC
GCCGGCATGA GCCTGGTACG GAGCGCCGAC CAACTGTACG TCATGCGCCT GCTGCTGGGC
GCGGCGGAGG CCGGCTTCAC GCCAGGCATC ATCTATTACC TGGCGCAGTG GTATCCGCGC
AGCGACCGGG CCCGCGCGAT GTCGTTCTTC TATATCGGCG CGGCGCTGGC CTCGGTGATC
GGCCTGCCGC TGTCGGGAGC CTTCCTGCAT CTGGACGGGC TGCTGGGCAT CGCCGGCTGG
CGCTGGCTGT TCCTGCTCGA AGGTCTGCCG GCCGCCGTGC TCGGCGTGGT GGTATTGCGC
TATCTGCCGG AGTCGCCCGA GCGCACCCAC TGGCTCGACG CTGCCCAGAA GCGCTGGCTG
ACCCGCACCC TGGCGGCCGA GCGGGAGACC ACGGCGATTT CCCATCACGA CGCCTGGCAT
GTGGCTTTCC GCAGCCGGCA GGTCTGGCTG CTCAGCCTGT TCTGGCTGCT GCAGGCCTTC
GGCACCATCG GCATCACCCT GTTCCTGCCG CTGATCGTGC AGTCGGTATC GGGGCAGGGC
GCCTTCACGG TCAGTCTGCT GTCGGCCTTG CCCTTCCTCT TCGCCTGCCT GTTCATGTAC
TTGAACGGTC GTCGTTCCGA TCTTTCCGGC GAGCGTGGCC TGCACCTGGG CGGCCCGCTG
CTGGGCGCCG GTATCCTGCT CGGGACCGCG GTGATTACCG ACAGCCAGCC GCTGGCCTAC
GCGATGCTGG TGTTCACCGT CGCCCTGAAC TGGGCGGCGA CCCCGGTGTT CTGGGCGACC
ACCACCGAGT ACCTGTCCGG GCCGGCGGCG GCGGTGTCGA TCGCGCTCAT CAACGCCATC
GCCAATATCG CCGGCCTGGG GCTGCCGCCG GTCATGGGCT GGATCAAGGA CACCACCCAC
AGCTACGACT ACGCCCTGCT GCTGGTGGCC TGCGCCCTGC TGGCCGGCGG TCTGCTGGGA
CTCCACCTGG GCGGCGGGCA GGCCCGTCGC CCGGTCCGTG ATCATGTTTC GAGGAGCCAT
TGA
 
Protein sequence
MTHATPDDSL HAGTMARLNL KLIPFLMLLY LIAYIDKANI SVAALQMNAD LGLTARMYGI 
GVGLFFVTYI LLEVPSNLIL SRVGARRWIA RIMITWGLVA AGMSLVRSAD QLYVMRLLLG
AAEAGFTPGI IYYLAQWYPR SDRARAMSFF YIGAALASVI GLPLSGAFLH LDGLLGIAGW
RWLFLLEGLP AAVLGVVVLR YLPESPERTH WLDAAQKRWL TRTLAAERET TAISHHDAWH
VAFRSRQVWL LSLFWLLQAF GTIGITLFLP LIVQSVSGQG AFTVSLLSAL PFLFACLFMY
LNGRRSDLSG ERGLHLGGPL LGAGILLGTA VITDSQPLAY AMLVFTVALN WAATPVFWAT
TTEYLSGPAA AVSIALINAI ANIAGLGLPP VMGWIKDTTH SYDYALLLVA CALLAGGLLG
LHLGGGQARR PVRDHVSRSH