| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51180 |
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| Symbol | algE2 |
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| ID | 7763963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5191069 |
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| End bp | 5194065 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643807943 |
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| Product | Secreted mannuronan C-5 epimerase |
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| Protein accession | YP_002802177 |
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| Protein GI | 226947104 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTACA ACGTCAAAGA TTTCGGGGCG CTGGGCGACG GCGTCAGCGA CGATACGGCC
GCCATCCAGG CGGCGATCGA TGCCGCCTAC GCGGCCGGCG GCGGCACCGT CTACCTGCCG
GCCGGCGAAT ACCGGGTCAG CGGCGGCGAG GAGCCTTCCG ATGGTTGCCT GACCATCAAG
AGTAATGTCC ATATCGTCGG CGCGGGGATG GGCGAGACGG TGATCAAACT GGTCGACGGC
TGGGACCAGG ACGTCACCGG CATCGTCCGC TCGGCCTACG GCGAGGAGAC CAGCAACTTC
GGCATGAGCG ACCTGACCCT CGACGGCAAC CGCGACAACA CCAGCGGCAA GGTCGACGGC
TGGTTCAACG GCTACATTCC CGGCGAGGAC GGCGCCGACC GCGACGTGAC CCTGGAGCGG
GTGGAAATCC GCGAAATGTC CGGTTACGGT TTCGACCCGC ACGAGCAGAC CGTCAACCTG
ACGATCCGCG ACAGCGTGGC CCACGATAAC GGCCTCGACG GCTTCGTCGC CGATTTCCAG
ATCGGCGGGG TGTTCGAGAA CAACGTCTCG TACAACAACG ACCGCCACGG CTTCAACGTG
GTCACCAGCA CCAACGACTT CGTCCTGAGC AACAACGTCG CCTACGGCAA CGGCGGCGCC
GGGCTGGTGG TGCAGCGCGG CTCGTCCGAC GTGGCGCACC CCTACGACAT CCTGATCGAC
GGCGGCGCCT ACTACGACAA CGGCCTGGAA GGCGTGCAGA TCAAGATGGC CCACGACGTC
ACCCTGCAGA ACGCCGAGAT CTACGGCAAC GGCCTATACG GGGTGCGCGT CTACGGCGCC
GAGGATGTGC AGATCCTCGA CAACTACATC CACGACAATT CGCAGAACGG TTCCTACGCG
GAAATCCTCC TGCAGTCCTA CGACGATACC GCCGGGGTGT CCGGCAATTT CTACACCACC
ACCGGCACCT GGATCGAAGG CAACACCATC GTCGGCTCGG CCAACTCCAC CTATGGCATC
CAGGAGCGCG ACGACGGCAC CGACTACAGC AGCCTCTACG CCAACAGCGT CAGCAATGTG
CAGAACGGCT CGGTGCGCCT CTACGGCGCC AACTCCGTCG TCTCCGACCT GCCCGGCACC
GGCCAGCAGG CGACCCTCGA AGGCACGGCC GGCAACGACA CGCTTGGCGG CAGCGACGCC
CACGAGACGC TGCTCGGGCT GGACGGCAAC GACCGCCTGA ACGGCGGCGC CGGCAACGAC
ATCCTCGACG GCGGCGCCGG GCGCGACAAC CTGACCGGCG GCGCGGGCGC CGACCTGTTC
CGCGTCTCCG CGCGCACCGA CAGCTACCGC ACCGACAGCG CCAGCTTCAA CGACCTGATC
ACCGACTTCG ACGCCAGCCA GGACCGCATC GACCTGTCCG CGCTGGGCTT CACCGGGCTG
GGCGACGGCT ATGACGGCAC CCTGCTGCTG CAGGTCAGTG CCGACGGCAG CCGCACCTAT
CTGAAGAGCC TGGAGGCGGA CGCCGAGGGG CGGCGTTTCG AGATCGCCCT GGACGGTAAC
TTCGCCGGCC TGCTCGGCGC CGGCAACCTG CTCTTCGAAC GCACCGCCAT CGAGGGGGAT
GCCGGCGACA ACGCCCTGCT CGGTACCTCG GCCGCCGAGA CATTGCTCGG CCATGCCGGC
AACGACACGC TCGACGGCGG GGCCGGCGAC GACATCCTGG TCGGCGGCGC CGGGCGCGAC
AGCCTCACCG GCGGCGCCGG AGCCGACGTG TTCCGCTTCG ACGCGCTGTC CGACAGCCAG
CGCAACTACG ACATCGGCGA CAACCAGGGC GACCGCATCG CCGACTTCGC GGTGGGCGAA
GACAAGCTCG ACGTATCGGC GCTGGGCTTC ACCGGGCTGG GCGACGGCTA CAACGGCACC
CTCGCCCTGG TACTCAACAG CGCCGGCGAC CGCACCTACG TGAAAAGCTA CGAGAACGGC
GCCGACGGCT ACCGCTTCGA GTTTTCCCTC GACGGCAACT ATCTGGAGCT GCTCGGCAAC
GAGGATTTCA TCTTCGCCAC GCCCAGCGGC CAGCAACTCC TCGAAGGCAG CGCCGGCAAC
GACAGCCTGC AGGGCACGGC CGCCGACGAG GTGATCCACG GCGGCGGCGG GCGCGACACG
CTGGCCGGCG GGGCCGGGGC CGACGTGTTC CGCTTCAGCG AACTGACCGA CAGCTACCGA
ACCGACAGTG CCAGCTATGC CGATCTGATC ACTGACTTCG ATGCCAGCGA GGATCGTATC
GACCTGTCCG GCCTCGGCTT CAGCGGTCTG GGCAACGGCT ACGGCGGTAC CCTGGCGCTG
CAGGTGAACA GCGCCGGCAC CCGCACCTAC CTGAAGAGCT TCGAGACGAA CGCCGCCGGC
GAGCGTTTCG AGATCGCCCT GGACGGCGAC CTGTCCGCGC TCGGCGGGGC CAACCTGATC
CTCGACGAGC GCGTCGTGCT GGCGGGCGGC GACGGCGACG ACACGCTTTC CGGCAGCAGC
GCGGCCGAGG AACTGCTCGG CGGGGCCGGC AACGACAGCC TGGACGGCGG CGCCGGCAAC
GACATCCTCG ACGGCGGGGC GGGGCGCGAC ACCCTGAGCG GCGGCAGCGG CAGCGACATC
TTCCGCTTCG GCGGCGCGCT CGACAGCTTC CGCAACTACG CCAGCGGGAC GAACGGCACC
GACAGCATCG TCGACTTCAC CCACGGCACC GACCTGATCG ACCTCTCCGC GCTCGGCTAT
ACCGGGCTGG GCGACGGCTA CAACGGTACC CTGGCGATAG TGCTGAACGA CGCCGGCACC
AAGACCTACC TGAAAAACCG TGAGAGCGAC GCCGAGGGCA ACCAGTTCGA GATCGCCCTG
GAGGGCAACC ACGCCGACCA GCTCGATGCG AGCGACTTCA TCTTCGCCAC GGCGGCCGCG
ACCACCGCGA TCGAGGTGGT CGGCGGCAGC GGCACCCAGA CCGATCAGCT CGCCTGA
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| Protein sequence | MDYNVKDFGA LGDGVSDDTA AIQAAIDAAY AAGGGTVYLP AGEYRVSGGE EPSDGCLTIK
SNVHIVGAGM GETVIKLVDG WDQDVTGIVR SAYGEETSNF GMSDLTLDGN RDNTSGKVDG
WFNGYIPGED GADRDVTLER VEIREMSGYG FDPHEQTVNL TIRDSVAHDN GLDGFVADFQ
IGGVFENNVS YNNDRHGFNV VTSTNDFVLS NNVAYGNGGA GLVVQRGSSD VAHPYDILID
GGAYYDNGLE GVQIKMAHDV TLQNAEIYGN GLYGVRVYGA EDVQILDNYI HDNSQNGSYA
EILLQSYDDT AGVSGNFYTT TGTWIEGNTI VGSANSTYGI QERDDGTDYS SLYANSVSNV
QNGSVRLYGA NSVVSDLPGT GQQATLEGTA GNDTLGGSDA HETLLGLDGN DRLNGGAGND
ILDGGAGRDN LTGGAGADLF RVSARTDSYR TDSASFNDLI TDFDASQDRI DLSALGFTGL
GDGYDGTLLL QVSADGSRTY LKSLEADAEG RRFEIALDGN FAGLLGAGNL LFERTAIEGD
AGDNALLGTS AAETLLGHAG NDTLDGGAGD DILVGGAGRD SLTGGAGADV FRFDALSDSQ
RNYDIGDNQG DRIADFAVGE DKLDVSALGF TGLGDGYNGT LALVLNSAGD RTYVKSYENG
ADGYRFEFSL DGNYLELLGN EDFIFATPSG QQLLEGSAGN DSLQGTAADE VIHGGGGRDT
LAGGAGADVF RFSELTDSYR TDSASYADLI TDFDASEDRI DLSGLGFSGL GNGYGGTLAL
QVNSAGTRTY LKSFETNAAG ERFEIALDGD LSALGGANLI LDERVVLAGG DGDDTLSGSS
AAEELLGGAG NDSLDGGAGN DILDGGAGRD TLSGGSGSDI FRFGGALDSF RNYASGTNGT
DSIVDFTHGT DLIDLSALGY TGLGDGYNGT LAIVLNDAGT KTYLKNRESD AEGNQFEIAL
EGNHADQLDA SDFIFATAAA TTAIEVVGGS GTQTDQLA
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