Gene Avin_45230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_45230 
Symbol 
ID7763391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4588050 
End bp4589702 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content72% 
IMG OID643807371 
Producthypothetical protein 
Protein accessionYP_002801612 
Protein GI226946539 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTT TGCATGCAGA CGATGCCCTC CTGATCCACT ACCAACTGAA CCACGACCCC 
TTCGCGCCGC GAACGCCGGG CTTCAAGTTC TTCCCGGCGC AGCGCAAGCA GGTGCTCGGC
CAGTTGCACC ACCTCGCCCG TTACAGCCGC CTGCTGTTGG TGGTCAGCGG GCCGTCGGGC
AGCGGCAAGA CACTTCTCCG GCAGGCGCTG GTGGCCAGCA GCAACAAGCA GACGGTGCAG
TGCGTCGTGG TTTCCGCGCG GGCCTCGGCG CGTGTCGACG GCCTGTTGCG GCAGATCGCC
CTCGGTCTGG GGCTGGATCG TGCGGACGAG CGAGCGATCC TGGATCAGGT GGAGCGGCTG
GCCTCCGCGG GCCAGGGCCT CTACCTGCTG GTGGACGATG CGGAGCTTCT GGAAACGGCC
GCCCTCGATG CGCTGCTGGC TCTGGCGGCG GGGACCGATA TAGGGCGGCC GCATGTGTTC
CTGTTCGGCG AGCCGGAACT GGTGGCGCGC CTGCAGGCTC TGGCCGACGG CGAGGAACGT
TTCCATGTGC TGCGGCTGAA TCCCTATACG CTGGATGACA CGCGCGAATA CCTGGCGCAG
CGCCTGGAGG GAGCGGGAGG CGACATCGGC CTGTTCAGCG ACGAACAGAT CGAGGCGATT
CACCGTGGGG CCGGCGGCTG GCCGGGAGAG ATCAACCGGC TCGCCCGCGA ACTGCTGCAC
GAGGAAATGC TGGCCGGACA CGAGGAAGAG GACGAGCGCG CGCCGGGCGC GATGCTGCCG
AAGAAGCACC TGCTCGCTCT GGCCGGGGTC GTCCTGGCCG TGGCGGTGGC CTGGTTCATG
CGCGGTGGGA CGGGAGACGA GGAGCCTGTG GCGCAGCAAC CGCAGGCGGA GGCACCGGCC
GCCCCGCCCG AGCCGACTGG CGCCGCGCCC GCGCCGTCCG TGGCGGGCGG CGCCCAGCCG
GTGCTGCGCG AGCCTCTGGC CCAGGCCGCG GGCGAGGCGG ATGCCGAGGA TATCGGGATC
GCCGGTCCGG CGGCGGTCGT GGCCGCCACC GCCAGTTCCG CACTCGCGCC GACCGTGCAG
GCGCCCGTCG TGCCATCGGT ACCTGCGCCG AAGCCCGAGG TCAGGGCGCC GGCGGCGGTG
CAGCCGACGA CTCCCAAGCC CAAGCCCGCC TCTCAAACCC CAGCCCCAGC TCCAGCCGTC
GCGAAGCCGG CCGCGCCACC CGCGCCGGCT CCTGCGCCGC GGGTCGTGGC GAAGCCTGCG
GCTTCAGCCC CGGCTCCGTC CGCCCCCGCT GCGCCGGTCG CCGCGAAGCC GGCCCCGGCG
GCTCCCGTCT CCCGGCCGGC GGCTGCCGCG TCGTCCGCCG CGCCGGCCGG AAGCGACTGG
TATCGCTCCC AGGCGGCCAC GCGCTACGCC CTGCAGGTGC TGGGCACGCG CTCGGAGGGC
AGCGCCCAGG CCTTCGTGCG TGCCCAGGGG GCGGGCTACC GTTATTTCCG GAAATTGCAT
CAGGGGAAGC CGCTGTTCGT GGTGACCTAC GGCAGTTTTG CCAGCCGCGC CGAAGCGCAG
GCGGCGGTCA GGACCCTTCC GGCATCGGTG CAGGCCAGCA AGCCCTGGCC GCGTACCTTC
GCCAGCATTC AGCAGGAGGC CGGCGTGCGC TGA
 
Protein sequence
MTSLHADDAL LIHYQLNHDP FAPRTPGFKF FPAQRKQVLG QLHHLARYSR LLLVVSGPSG 
SGKTLLRQAL VASSNKQTVQ CVVVSARASA RVDGLLRQIA LGLGLDRADE RAILDQVERL
ASAGQGLYLL VDDAELLETA ALDALLALAA GTDIGRPHVF LFGEPELVAR LQALADGEER
FHVLRLNPYT LDDTREYLAQ RLEGAGGDIG LFSDEQIEAI HRGAGGWPGE INRLARELLH
EEMLAGHEEE DERAPGAMLP KKHLLALAGV VLAVAVAWFM RGGTGDEEPV AQQPQAEAPA
APPEPTGAAP APSVAGGAQP VLREPLAQAA GEADAEDIGI AGPAAVVAAT ASSALAPTVQ
APVVPSVPAP KPEVRAPAAV QPTTPKPKPA SQTPAPAPAV AKPAAPPAPA PAPRVVAKPA
ASAPAPSAPA APVAAKPAPA APVSRPAAAA SSAAPAGSDW YRSQAATRYA LQVLGTRSEG
SAQAFVRAQG AGYRYFRKLH QGKPLFVVTY GSFASRAEAQ AAVRTLPASV QASKPWPRTF
ASIQQEAGVR