| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_43400 |
|---|
| Symbol | gcl |
|---|
| ID | 7763213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4383677 |
|---|
| End bp | 4385380 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643807195 |
|---|
| Product | glyoxylate carboligase |
|---|
| Protein accession | YP_002801436 |
|---|
| Protein GI | 226946363 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3960] Glyoxylate carboligase |
|---|
| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGGCTG CTCCGGGGCG CTTTCCAACG AAATATTTCC ATGAGAGTGT ATCTGTCGAA
TTTGCCATTA ACTACGATTT CATTGTTTCT GATGAAAGTC GTCGATCCAA TACCCGCACC
AACCCGGGCA ACATCGGCGT CTGCATCGGC ACTTCCGGCC CCGCCGGGAC CGACATGGTC
ACCGGCCTGT ACTCAGCCTC GGCCGACTCC ATCCCGATCC TCTGCATCAC CGGCCAAGCT
CCGCGGGCCC GCCTGCACAA GGAAGACTTC CAGGCCGTCG ATATCACCAG CATCGTCAAG
CCGGTGACCA AGTGGGCCAG CACCGTTCTC GAACCGGGGC TGGTGCCCTA TGCCTTCCAG
AAGGCCTTCT TCGAGATGCG CAGCGGCCGG CCCGGCCCGG TACTGCTCGA CCTGCCGTTC
GACGTGCAGA TGGCCGAGAT CGAATTCGAC ATCGACGCCT ACCAGCCACT GTCGGTGAGC
AGGCCGTCGG CCAGCCGCAT CCAGGCCGAG AAGGCCCTGG CCATGCTCAA CGAGGCCGAG
CGCCCGCTGA TCGTCGCCGG CGGCGGGATC ATTAACGCCG ACGCCGCCGA CAAGCTGGTC
GAGTTCGCCG AACTGACCGG CGTGCCGGTC ATCCCGACCC TGATGGGCTG GGGCAGCATC
CCCGACGACC ACCGCCTGAT GGTCGGCATG TGCGGCCTGC AGACCGCACA CCGCTATGGC
AATGCCAACC TGCTGGCCTC CGACCTGGTG TTCGGCATCG GCAACCGCTG GGCCAACCGC
CACACCGGCT CGGTCGAGGT CTATACCCGG GACCGCCGCT TCATCCACGT CGACATCGAG
CCGACCCAGA TCGGCCGCGT GTTCACCCCG GACCTGGGCA TCGTTTCCGA CGCCGGCGCC
GCCCTCGACG CCTTCCTCGA AGTGGCCCGC GAATGGCGGG CCGCCGGTAG GCTGAAGGAC
CGCGGCGGTT GGGTCGAGGC CTGCCGCGAG CGCAAGCGCA GCCTGCAGCG CAAGACCCAC
TTCGACGAGG TGCCGATCAA GCCGCAGCGC GTGTACGAGG AAATGAACGC GTTCTTCGGC
AAGGACACTT GCTACGTCAG CACCATCGGC CTGTCGCAGA TCGCCGGCGC GCAGTTCCTG
CACGTCTACA AGCCGCGCCA CTGGATCAAC TGCGGCCAGG CCGGCCCGCT GGGCTGGACC
ATTCCGGCGG CGCTCGGCGT GGTCAAGGCC GACCCGCGGC GTCCGGTGGT CGCGCTGTCC
GGCGACTACG ACTTCCAGTT CATGATCGAA GAGCTGGCCG TGGGCGCGCA GTTCAACCTG
CCCTACATCC ACGTGCTGGT GAACAACTCC TACCTGGGCC TGATCCGCCA GGCGCAGCGC
AACTTCGAGA TCGACTACTG CGTGCAGTTG TCCTTCGAGA ACATCAACGC GCCGCAGCTC
AACGGCTACG GCGTGGACCA CGTCGCGGTG GTCGAGGGCC TGGGCTGCAA GGCGATCCGC
GTGTTCGAAC CCGGCGAGCT GCCGGGCGCC TTCGCCAGGG CCAGGCAGTT GATGAAGGAG
TTCCGCGTGC CGGTGGTGGT CGAGGTCATC CTGGAGCGTG TCACCAACAT CGCCATGGGC
ACCGAGATCG ATGCCGTCAC CGAGTTCGAG GAACTGGCCA GGACCGGGGC CGACGCCCCG
ACCTCGATCC TGCCGCTCGA CTGA
|
|---|
| Protein sequence | MLAAPGRFPT KYFHESVSVE FAINYDFIVS DESRRSNTRT NPGNIGVCIG TSGPAGTDMV
TGLYSASADS IPILCITGQA PRARLHKEDF QAVDITSIVK PVTKWASTVL EPGLVPYAFQ
KAFFEMRSGR PGPVLLDLPF DVQMAEIEFD IDAYQPLSVS RPSASRIQAE KALAMLNEAE
RPLIVAGGGI INADAADKLV EFAELTGVPV IPTLMGWGSI PDDHRLMVGM CGLQTAHRYG
NANLLASDLV FGIGNRWANR HTGSVEVYTR DRRFIHVDIE PTQIGRVFTP DLGIVSDAGA
ALDAFLEVAR EWRAAGRLKD RGGWVEACRE RKRSLQRKTH FDEVPIKPQR VYEEMNAFFG
KDTCYVSTIG LSQIAGAQFL HVYKPRHWIN CGQAGPLGWT IPAALGVVKA DPRRPVVALS
GDYDFQFMIE ELAVGAQFNL PYIHVLVNNS YLGLIRQAQR NFEIDYCVQL SFENINAPQL
NGYGVDHVAV VEGLGCKAIR VFEPGELPGA FARARQLMKE FRVPVVVEVI LERVTNIAMG
TEIDAVTEFE ELARTGADAP TSILPLD
|
|---|
| |