Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_42330 |
Symbol | |
ID | 7763109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4259912 |
End bp | 4261882 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643807084 |
Product | Metallo-dependent hydrolase |
Protein accession | YP_002801332 |
Protein GI | 226946259 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGACG ATCCACCCCG TCACAGCCGC CGCCAGTTCC TCGCCGCCGG TTCGCTCCTG GGCGCGGCAG GCGTGCTCTG GTCCGCGCTG CCCTTCGCCG GCTCCACCCA AGACACCACT TCAGGGGGTT CCATGACCGC CGATCTGATC CTCTTCAATG GCCGCATCCA TACCGTCGAC CGCGACAAGC CCAGCGCCAC GGCCGTGGCC GTCAAGGACG GCCGGTTTCT CGCCGTCGGC AGCGACATCG AGGCCATGGC CCTGCGCGGC GCCGCCACGC GGGTGATCGA CCTGCAACGA CGCACCGTGA TCCCCGGCCT CAACGACTCG CACCTGCACC TGATCCGTGG CGGGCTCAAC TACAACCTGG AGCTGCGCTG GGAAGGCGTG CCCTCGCTGG CCGATGCCTT GCGCATGCTC AAGGAGCAGG CCGAGCGCAC GCCAGCGCCG CAGTGGGTGC GGGTGGTCGG CGGCTGGACC GAATTCCAGT TCGCCGAGAA ACGCATGCCG ACCCTCGACG AACTGAACCG GGCGGCGCCG GATACCCCGG TGTTCGTCCT GCACCTCTAC GACCGCGCGC TGCTCAACCG CGCCGCGCTC GAGGTGGTGG GCTACACCCG CGACACCCCC AACCCGCCCG GCGGCGAGAT CCAGCGCGAC GCCAGCGGCA ACCCCACCGG CATGCTGATC GCCCGTCCCA ACGCGATGAT CCTCTACGCC ACCCTGGCCA AGGGGCCGAA GCTGCCGCTG GAATACCAGG TCAACTCGAC CCGCCAGTTC ATGCGCGAAC TCAACCGCCT GGGTCTGACC AGCGCCATCG ACGCCGGCGG CGGCTTCCAG AACTACCCGG AGGATTACGA GGTGATCCGC AAGCTGGCCG AGGACGACCA GCTCAGCGTG CGCATCGCCT ACAACCTGTT CACCCAGAAG CCCAAGGAAG AGCTGGCCGA TTTCCAGAAC TGGAGCAAGA TGGTCAAGCC CGGCGCGGGC AACGATTTCT TCCGCCACAA CGGCGCCGGC GAAATGCTGG TGTTCTCCGC CGCCGACTTC GAGGACTTCC TCGAACCGCG CCCGGACCTG CCGGCGAGCA TGGAGCAGGA GCTGGAGCCG GTGGTCCGCC ATCTGGTCGA GCAGCGCTGG CCGTTCCGCC TGCACGCCAC CTACGACGAG TCCATCTCGC GCATGCTCGA CGTGTTCGAG AAGGTCGACC GCGACATTCC CTTCGCCGGC CTGCCCTGGT TTTTCGACCA TGCCGAGACC ATCAGCCCGC GCAACATCGA GCGGGTCAGG GCCCTGGGCG GCGGCATCGC CATCCAGCAT CGCATGGCCT TCCAGGGCGA ATACTTCGTC GACCGCTACG GCAAGCGGGC CGCCGAGCAG ACCCCGCCGA TCCAGCGCAT GCTTTCCGAG GGCGTGCCGG TGGGCGCCGG CACCGATGCC ACCCGGGTGG CCAGCTACAA CCCCTGGACC GCGCTGTACT GGCTGGCCAG CGGCAAGACC GTCGGCGGCG CGCAGCTCTA CCCGCAGGGA CTGTCCAGGG AAACCGCGCT GGAGTTGTTC ACCCGCGGCA GCGCCTGGTT CTCCAGCGAG CAGGGCAGGA AAGGGCAGAT CAAGGTGGGG CAGTTCGCCG ACCTGGCGGC CTTGTCGGCG GACTATTTCA GCGTCGAGGA AGAACGGATC AAGTGGCTCG AGTCGGTGCT GACGGTGGTC GGCGGCAAGG TGGTCTACGC CGCCGCCGAA TTCGACGAAC TCGACCCGCC GACCCCGCCG GTGCTGCCGG ACTGGTCGCC GGTGAGCCGC GTGCCCGGCC ACTGGAAACC CGCCGCGCCG CTGGCCGCCC GGGTGCACCA GTGCGCCGGC GCCTGCACCG TGCACGCCCA CAACCACGAA CGGGCGCGCC TCTCCGACGT GCCGGTCAGC GACCACCAGG GCTTCTGGGG CGCGCTGGGC TGCTCCTGTT TCGCCTTCTG A
|
Protein sequence | MHDDPPRHSR RQFLAAGSLL GAAGVLWSAL PFAGSTQDTT SGGSMTADLI LFNGRIHTVD RDKPSATAVA VKDGRFLAVG SDIEAMALRG AATRVIDLQR RTVIPGLNDS HLHLIRGGLN YNLELRWEGV PSLADALRML KEQAERTPAP QWVRVVGGWT EFQFAEKRMP TLDELNRAAP DTPVFVLHLY DRALLNRAAL EVVGYTRDTP NPPGGEIQRD ASGNPTGMLI ARPNAMILYA TLAKGPKLPL EYQVNSTRQF MRELNRLGLT SAIDAGGGFQ NYPEDYEVIR KLAEDDQLSV RIAYNLFTQK PKEELADFQN WSKMVKPGAG NDFFRHNGAG EMLVFSAADF EDFLEPRPDL PASMEQELEP VVRHLVEQRW PFRLHATYDE SISRMLDVFE KVDRDIPFAG LPWFFDHAET ISPRNIERVR ALGGGIAIQH RMAFQGEYFV DRYGKRAAEQ TPPIQRMLSE GVPVGAGTDA TRVASYNPWT ALYWLASGKT VGGAQLYPQG LSRETALELF TRGSAWFSSE QGRKGQIKVG QFADLAALSA DYFSVEEERI KWLESVLTVV GGKVVYAAAE FDELDPPTPP VLPDWSPVSR VPGHWKPAAP LAARVHQCAG ACTVHAHNHE RARLSDVPVS DHQGFWGALG CSCFAF
|
| |