Gene Avin_42330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42330 
Symbol 
ID7763109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4259912 
End bp4261882 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content69% 
IMG OID643807084 
ProductMetallo-dependent hydrolase 
Protein accessionYP_002801332 
Protein GI226946259 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACG ATCCACCCCG TCACAGCCGC CGCCAGTTCC TCGCCGCCGG TTCGCTCCTG 
GGCGCGGCAG GCGTGCTCTG GTCCGCGCTG CCCTTCGCCG GCTCCACCCA AGACACCACT
TCAGGGGGTT CCATGACCGC CGATCTGATC CTCTTCAATG GCCGCATCCA TACCGTCGAC
CGCGACAAGC CCAGCGCCAC GGCCGTGGCC GTCAAGGACG GCCGGTTTCT CGCCGTCGGC
AGCGACATCG AGGCCATGGC CCTGCGCGGC GCCGCCACGC GGGTGATCGA CCTGCAACGA
CGCACCGTGA TCCCCGGCCT CAACGACTCG CACCTGCACC TGATCCGTGG CGGGCTCAAC
TACAACCTGG AGCTGCGCTG GGAAGGCGTG CCCTCGCTGG CCGATGCCTT GCGCATGCTC
AAGGAGCAGG CCGAGCGCAC GCCAGCGCCG CAGTGGGTGC GGGTGGTCGG CGGCTGGACC
GAATTCCAGT TCGCCGAGAA ACGCATGCCG ACCCTCGACG AACTGAACCG GGCGGCGCCG
GATACCCCGG TGTTCGTCCT GCACCTCTAC GACCGCGCGC TGCTCAACCG CGCCGCGCTC
GAGGTGGTGG GCTACACCCG CGACACCCCC AACCCGCCCG GCGGCGAGAT CCAGCGCGAC
GCCAGCGGCA ACCCCACCGG CATGCTGATC GCCCGTCCCA ACGCGATGAT CCTCTACGCC
ACCCTGGCCA AGGGGCCGAA GCTGCCGCTG GAATACCAGG TCAACTCGAC CCGCCAGTTC
ATGCGCGAAC TCAACCGCCT GGGTCTGACC AGCGCCATCG ACGCCGGCGG CGGCTTCCAG
AACTACCCGG AGGATTACGA GGTGATCCGC AAGCTGGCCG AGGACGACCA GCTCAGCGTG
CGCATCGCCT ACAACCTGTT CACCCAGAAG CCCAAGGAAG AGCTGGCCGA TTTCCAGAAC
TGGAGCAAGA TGGTCAAGCC CGGCGCGGGC AACGATTTCT TCCGCCACAA CGGCGCCGGC
GAAATGCTGG TGTTCTCCGC CGCCGACTTC GAGGACTTCC TCGAACCGCG CCCGGACCTG
CCGGCGAGCA TGGAGCAGGA GCTGGAGCCG GTGGTCCGCC ATCTGGTCGA GCAGCGCTGG
CCGTTCCGCC TGCACGCCAC CTACGACGAG TCCATCTCGC GCATGCTCGA CGTGTTCGAG
AAGGTCGACC GCGACATTCC CTTCGCCGGC CTGCCCTGGT TTTTCGACCA TGCCGAGACC
ATCAGCCCGC GCAACATCGA GCGGGTCAGG GCCCTGGGCG GCGGCATCGC CATCCAGCAT
CGCATGGCCT TCCAGGGCGA ATACTTCGTC GACCGCTACG GCAAGCGGGC CGCCGAGCAG
ACCCCGCCGA TCCAGCGCAT GCTTTCCGAG GGCGTGCCGG TGGGCGCCGG CACCGATGCC
ACCCGGGTGG CCAGCTACAA CCCCTGGACC GCGCTGTACT GGCTGGCCAG CGGCAAGACC
GTCGGCGGCG CGCAGCTCTA CCCGCAGGGA CTGTCCAGGG AAACCGCGCT GGAGTTGTTC
ACCCGCGGCA GCGCCTGGTT CTCCAGCGAG CAGGGCAGGA AAGGGCAGAT CAAGGTGGGG
CAGTTCGCCG ACCTGGCGGC CTTGTCGGCG GACTATTTCA GCGTCGAGGA AGAACGGATC
AAGTGGCTCG AGTCGGTGCT GACGGTGGTC GGCGGCAAGG TGGTCTACGC CGCCGCCGAA
TTCGACGAAC TCGACCCGCC GACCCCGCCG GTGCTGCCGG ACTGGTCGCC GGTGAGCCGC
GTGCCCGGCC ACTGGAAACC CGCCGCGCCG CTGGCCGCCC GGGTGCACCA GTGCGCCGGC
GCCTGCACCG TGCACGCCCA CAACCACGAA CGGGCGCGCC TCTCCGACGT GCCGGTCAGC
GACCACCAGG GCTTCTGGGG CGCGCTGGGC TGCTCCTGTT TCGCCTTCTG A
 
Protein sequence
MHDDPPRHSR RQFLAAGSLL GAAGVLWSAL PFAGSTQDTT SGGSMTADLI LFNGRIHTVD 
RDKPSATAVA VKDGRFLAVG SDIEAMALRG AATRVIDLQR RTVIPGLNDS HLHLIRGGLN
YNLELRWEGV PSLADALRML KEQAERTPAP QWVRVVGGWT EFQFAEKRMP TLDELNRAAP
DTPVFVLHLY DRALLNRAAL EVVGYTRDTP NPPGGEIQRD ASGNPTGMLI ARPNAMILYA
TLAKGPKLPL EYQVNSTRQF MRELNRLGLT SAIDAGGGFQ NYPEDYEVIR KLAEDDQLSV
RIAYNLFTQK PKEELADFQN WSKMVKPGAG NDFFRHNGAG EMLVFSAADF EDFLEPRPDL
PASMEQELEP VVRHLVEQRW PFRLHATYDE SISRMLDVFE KVDRDIPFAG LPWFFDHAET
ISPRNIERVR ALGGGIAIQH RMAFQGEYFV DRYGKRAAEQ TPPIQRMLSE GVPVGAGTDA
TRVASYNPWT ALYWLASGKT VGGAQLYPQG LSRETALELF TRGSAWFSSE QGRKGQIKVG
QFADLAALSA DYFSVEEERI KWLESVLTVV GGKVVYAAAE FDELDPPTPP VLPDWSPVSR
VPGHWKPAAP LAARVHQCAG ACTVHAHNHE RARLSDVPVS DHQGFWGALG CSCFAF