Gene Avin_42150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_42150 
Symbol 
ID7763093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4244528 
End bp4245313 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID643807068 
Product2-hydroxypent-2,4-dienoate hydratase 
Protein accessionYP_002801317 
Protein GI226946244 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.293913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCACG AATCCCGTCT CCAGGCCGCC GCCGCGGTCC TGGCCGAAGC GCGCAAGACC 
GGCCGGCCCT GCTGCCGGAT TTCCGAGCGC TTCGGCATCC AGACCCTGGC CGACGCCTAT
GCCATCCAGG AGCTGAACAC CCGGGCCGCC CTGGCCCAGG GGCGCCGCCC GGTCGGCCGC
AAGATCGGCC TGACCTCGCT GGCCGTGCAG CAGCAACTGG GCGTCGACCG GCCCGACTTC
GGCATGCTGT TCGCCGACAT GGAGCGCCGC GACGGCGAGG CCATCGACAC CGGCCGGCTG
ATCCAGCCCA AGGCCGAAGG GGAGATCGCC TTCGTCCTCG GCCGCGACCT GCCCGCCGTC
GATACCACCC TGGGCGAACT GGTCAACGCC GTGGAGTTCG TCCTGCCGGC GCTGGAGATC
GTCGACTCGG CGATTGAGGA CTGGAAGATC ACCCTGGTCG ACACCGTGGC CGACAACGCC
TCCTCGGCGC TCTACGTGCT GGGCAGGACG CCGACCAAGC TGAGCGGGCT CGACCTCGCC
CTGGAGGGCA TGCTCTTGGA GAAGAACGGC GCCCAGGCCG CCATCGGTGT CGGCGCCGCC
TGCCTGGGCA ACCCGCTGGA GGCCTGCCTG TGGCTGGCGC GGACCATGGC CGAGGTCGGT
CGCCCGCTCC AGGCCGGCGA CGTGCTGCTC TCCGGCGCCC TCGGGCCGAT GGTGCCGGTG
GCCGCCGGCG ACGGCCTGCG CCTGCGCCTG ACCCGGCTGG GCGAGGTGAG CTGCCGTTTC
GCCTGA
 
Protein sequence
MTHESRLQAA AAVLAEARKT GRPCCRISER FGIQTLADAY AIQELNTRAA LAQGRRPVGR 
KIGLTSLAVQ QQLGVDRPDF GMLFADMERR DGEAIDTGRL IQPKAEGEIA FVLGRDLPAV
DTTLGELVNA VEFVLPALEI VDSAIEDWKI TLVDTVADNA SSALYVLGRT PTKLSGLDLA
LEGMLLEKNG AQAAIGVGAA CLGNPLEACL WLARTMAEVG RPLQAGDVLL SGALGPMVPV
AAGDGLRLRL TRLGEVSCRF A