| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_42140 |
|---|
| Symbol | |
|---|
| ID | 7763092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4242561 |
|---|
| End bp | 4244420 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643807067 |
|---|
| Product | feruloyl-CoA synthase |
|---|
| Protein accession | YP_002801316 |
|---|
| Protein GI | 226946243 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0829749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC TCGTGCATGT CTCCGAGAAA CTGGCTCCGG CCGATGTTCT TCTGGAATCC
CGCGAAAAAG GTGAGTTCGT CCTGCGTTCG GCTCAGCCAT TGCAAGCCTA CGCGCGCTGC
ACCGGCGAGT GGCTGGAGCG CTGGGCACGG GAGGCTCCCG AGCGGACCTT TCTCGCCGAA
CGGCGCAACG GTGGCTGGTC TGGCCTGAGC TACCGCGAGG TGCGCAAGCG CGTCGGTTGC
CTGGCCCAGG GCCTGCTGGA GCTGGATATC CCCGCCGGCC GGCCGGTGCT GATGCTGTCC
GACGTGGATA TCGACCAGGC CTTGCTCAGC CTCGCCGCCC TGCACGTGGG CATTCCGGTG
GCCACCGTCT CGGTGGCCTA TTCGCGCAAC ACCGCCGGCG GTTGCAGCAA GCTCAAGGCC
ATCATCGAAG TGCTGGAACC CGCGGTGATT TTCGTCAGCG ACGGCGACGC CTATTACCGG
GCCGTCGAAC TGGTGAAGCC GAACTGCCTG GTGGTGGCCG CGCGCAACGC CCAGGAGATC
GAAAGCGCCC TGCCGTTGCC AATGCTCTAC AAGGACGAGA GTCCGGCCGT GATGGAAGCC
TTCGGCCGGG TTACCGGCGA CACCCCGGCG CGCTACCTGA TGACCTCCGG CTCCACCGGC
GAGCCCAAGG CGGTGGTCAA CACCCATCGC ATGCTGTGCG CCAACCAGCA GGCCATCGCC
CAGTGCTGGC CGTTCCTCGA AACCTGCGAG GTGGTGGTGC TGGACTGGCT GCCGTGGAGC
CACACCTTCG GCGCCAACCA CAACTTCAAT CTGGTGCTGC GTAACGGCGG CACCCTCTAC
ATCGACGACG GCCGCCCGAT ACCCGGGCAG ATCGAACGTA CCGTGGAGAA CATCAAGGCG
GTCAAACCCA CGCTGTTTTT CAACGTACCC CGCGGCTACG AAGCGCTGCT GCCTTATCTG
GAGCGCGACG AGGCCCTGGC CAGGGCATTG TTCGGCCGGC TGGAGCTGCT TTTCTATGCC
GCCGCCGCGC TGCCGTCGAG CACCTGGGAG CGGCTGATGG CCTGCGCGGG CCGGGTGCGC
AAGGAGCCGC TGTTCTTCAG CAGCGAATGG GGCGCCACCG AAACCTCGCC GGTGCTGACC
AATGTGCACT ACCCGATCGA CAGGCCCGGC AATATCGGCC TGCCGGTGCC AGGCATCGAG
ATCAAGTTCG TGCCCTCCGG CGACAAGCAG GAGATGCGTG TGCGTGGCCC CTCGGTGTTC
AGCCACTACC TCAACAATCT GTCAAAGACG GCCGAAGCCT TCGATGACGA GGGCTTTTAC
AAGATCGGCG ATGCCGGTCG CCTGGTGGAC CCCGATCACC CGGAAAAAGG CATCCTTTTC
GACGGTCGCG TGACCGAGGA CTTCAAGCTG ACCACCGGCA CCTGGGTCTC GGTCGGCGTC
CTGCGCCCGA AGCTGGTCAG TGCTCTGGCG CCTTATGCCT CGGATTGCGT CATCTGTGGA
CATGATCAGG ACGTGATCGG CGCGCTGATA TATCCGACTC CGGCCCTGCG CGAATTGGCG
GGCGAGGCGG GTAAGCGCAT GACGGTCGAC GAACTCGCCC AGCAGCCGGA GGTTCGTCTG
GCGCTGTGCG CCGGGCTGCA GGCGCTGGCC AAGGAGTGCC CGGCGTCGTC CCAGCACGCC
GTTCGCCTGC TCGTGCTCGA TTCGCCCCCC AGCCTGGAGG CCGGCGAGAT CACCGACAAG
GGCTACATCA ACCAGCGCAC GGCATTGAGC CTGCGCGCCG ATGTGGTCAA GCGGCTGTAT
GCCGAGTCCC TCGACCCGGC CGTCATCCTG CTCGCCGAAG CCTATGGAGA AACCGTATGA
|
|---|
| Protein sequence | MNDLVHVSEK LAPADVLLES REKGEFVLRS AQPLQAYARC TGEWLERWAR EAPERTFLAE
RRNGGWSGLS YREVRKRVGC LAQGLLELDI PAGRPVLMLS DVDIDQALLS LAALHVGIPV
ATVSVAYSRN TAGGCSKLKA IIEVLEPAVI FVSDGDAYYR AVELVKPNCL VVAARNAQEI
ESALPLPMLY KDESPAVMEA FGRVTGDTPA RYLMTSGSTG EPKAVVNTHR MLCANQQAIA
QCWPFLETCE VVVLDWLPWS HTFGANHNFN LVLRNGGTLY IDDGRPIPGQ IERTVENIKA
VKPTLFFNVP RGYEALLPYL ERDEALARAL FGRLELLFYA AAALPSSTWE RLMACAGRVR
KEPLFFSSEW GATETSPVLT NVHYPIDRPG NIGLPVPGIE IKFVPSGDKQ EMRVRGPSVF
SHYLNNLSKT AEAFDDEGFY KIGDAGRLVD PDHPEKGILF DGRVTEDFKL TTGTWVSVGV
LRPKLVSALA PYASDCVICG HDQDVIGALI YPTPALRELA GEAGKRMTVD ELAQQPEVRL
ALCAGLQALA KECPASSQHA VRLLVLDSPP SLEAGEITDK GYINQRTALS LRADVVKRLY
AESLDPAVIL LAEAYGETV
|
|---|
| |