Gene Avin_41870 details

Gene Information

• Locus tag: Avin_41870
• ID: 7763066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 4221359
• End bp: 4222069
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643807041
• Product: Transposase IS116/IS110/IS902
• Protein accession: YP_002801290
• Protein GI: 226946217
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3547] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTCG TGACGCCCAG GACCGAGGCC CAGCAGACGC TCTCGGTCCT GCATCGCATG 
CGGGAATCCC TGGTGCGGGA TCGGACCAAA ACCGCCAATC AGATGCATGG TTTTCTGCTG 
GAGTTCGGAG TCAGTCTGCC CAAAGGGTTG GCAGTCATGA GGCGCCTGCC CGGTGTCCTG 
ACCGAGCGGC CACTGCCTGT TCGGTTAAGC CTGCTGCTGC AGCGCCTGCA CGCGCACTTC 
GACTACCTCG ACAAACAGAT CAGGGAACTG GACAAGGAGG TTGCAGGCCA GCTCGCGAGC 
GATGACCTGG GCAGCCGCTT GCTGACCATC CCATGCATCG GCCCCATCAC CGCCAGCCTA 
TTGGCTGCCG AAATAGGCGA TGGCAGGCAA TACGGATGCA GCCGGGACTT CGCCGCGTCC 
GTCGGTCTGG TGCCCAGGCA GTACAGCACC GGTGGCAAAG CCAGGCTACT GGGCATCAGC 
AAGCGCGGCG ACAAGAGGCT CAGGCAACTG CTGGTCCAGT GCGCCAGGGT TTACCTGCAA 
CGACTGGAGC ATCAGCGCGG CGCCCTGGCC GACTGGGTAC GCGCCCTGCG CAGTCGCCGC 
CACTCGAACG TGGTCGCCTG CGCCTTGGCC AACAAGTTGG CTCGCATCGC CTGGTCGATC 
GCGGCCAACC ACACGCAGTT CGAAGCGGGG CCAGACGCCT CGGCGGCCTG A 

 

Protein sequence

MRFVTPRTEA QQTLSVLHRM RESLVRDRTK TANQMHGFLL EFGVSLPKGL AVMRRLPGVL 
TERPLPVRLS LLLQRLHAHF DYLDKQIREL DKEVAGQLAS DDLGSRLLTI PCIGPITASL 
LAAEIGDGRQ YGCSRDFAAS VGLVPRQYST GGKARLLGIS KRGDKRLRQL LVQCARVYLQ 
RLEHQRGALA DWVRALRSRR HSNVVACALA NKLARIAWSI AANHTQFEAG PDASAA