Gene Avin_39960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39960 
Symbol 
ID7762885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4048161 
End bp4048925 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID643806858 
Producthypothetical protein 
Protein accessionYP_002801110 
Protein GI226946037 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.228774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT TCGCCTTCCC GCAACGACTG CTGCAGGCCG CCACTTTCGT CACCGCCGTT 
TCCGGCGCGG CGGACAGCGT CTTCGCGCAG ACGACCGACG GCAGCCCGGC CGGCGCCGGC
GACAAGCCGG TGACGCTGTT CAACATCCTT CCCCTCAAGC CGGAGGCGTT CCCGGCTTTC
CTGCCGGTGA TGCAGGCCAA CGCGAGCGCC TCGCGCCGGG AACAGGGCAA TTTCTCGTTC
GATGTGTTCC AGCCGGAGGA CGGCGCTCCC AGGCTCTATC TGTTCGAGCG CTGGGCCGGC
CAGGCCGTCC TCGACAAGCA CATGACCCAG CCCAACCTCA AGGCGGTCCT GCAACGCGCC
GACAGCGATC TCGCCGGCGA AGCCAGCAGC CTGCGCCTGA GCGCGGTGCC CGGCCTCGGG
GCCGACGCCC GCAAGCCGTT CGCCACGGCT GCCGCCGCCG GATCGCGCAA CGTGATCGTG
CTGCTCAGCG TCAAGCCGGA ACGGGAACAG ACCTTCCTCG AAGCCCTGGC CGAAGTGACG
CCGCATGCGC GGCGGGCGCC CGGCAACCAC GCCTTCGAAC TGTACGCCGT CGAATCGCAG
CCACGGACCT ATCTGCTGTT CGAGCGCTGG GACAACGCGG CCTCGCACGA GGCGCACCTG
GCCCAGGACT ACTCCAAGCG ACTGGACGCG GTGTTGCCCG GCACGCTGGC CGCTCCCGTC
GGCGCGGCCA ATCGCTTCCT GGTCAAGGAT GTCGCGACCG ACTGA
 
Protein sequence
MKTFAFPQRL LQAATFVTAV SGAADSVFAQ TTDGSPAGAG DKPVTLFNIL PLKPEAFPAF 
LPVMQANASA SRREQGNFSF DVFQPEDGAP RLYLFERWAG QAVLDKHMTQ PNLKAVLQRA
DSDLAGEASS LRLSAVPGLG ADARKPFATA AAAGSRNVIV LLSVKPEREQ TFLEALAEVT
PHARRAPGNH AFELYAVESQ PRTYLLFERW DNAASHEAHL AQDYSKRLDA VLPGTLAAPV
GAANRFLVKD VATD