Gene Avin_39140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39140 
Symbol 
ID7762803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3965294 
End bp3967885 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content66% 
IMG OID643806777 
ProductGlycosyl transferase, family 2 
Protein accessionYP_002801029 
Protein GI226945956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5309] Exo-beta-1,3-glucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0104614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCGC ATAAATTCGG ACTCAATCTG GTGGTGGTCG TGGCAGTCGC TGCGCTCTTC 
ACCGGAATCT GGGCGCTCTA CAACCTGCCG GTCACCGCGC CGGACTGGCC CGAGCAGATC
TCCGGCTACT CCTTCTCCCC CTTCCGCCCC GGGCAGAATC CCCAGGAAAA CCGCTACCCG
AGCGACGATG AAATCCGCGC CGACCTGGAG TTGCTCAGCC GGCAGACCGA CAGCATCCGC
ACCTATTCGG TGGACGGCAA CCTGGCCAAC GTGCCGCGCC TGGCCGAGGA GCTGGGCCTG
CGCGTGACCC TGGGCATCTG GATCAGCCAG GACATGGAGC GCAACGAGCG GGAAATCGCC
AAGGCCATCG AGCTGGCCAA GAGCTCGCGC AGCGTGGTGC GCGTGGTGGT CGGCAACGAG
GCGCTGTTCC GCAGCGAGAT CACTCCCGAG GCGCTGATCG CCTACATCGA CCGGGTCCGC
GCCGCGGTCA AGGTGCCGGT GACCACCTCC GAGCAGTGGC ACATCTGGCA GGAATACCCC
GAGCTGGGCC GCCACGTCGA CCTGATCGCC GCGCACATCC TGCCCTACTG GGAATTCGTG
CCGATGGAGG ACTCCGTCCA GTTCACCCTC GACCGCGCCC GCGACCTGAA GAAACTGTTC
CCGAGAAAGC CGCTGCTGCT CTCGGAGGTC GGCTGGCCGA GCAACGGCCG TACCCGCGGC
GGCGCCGAGG CCACCCAGAT CGACCAGGCG ATCTACCTGC GCACCCTGGT CAATACCCTG
AACGCCCAGG GCTACAACTA CTTCGTCATC GAGGCCTTCG ACCAGCCCTG GAAGATCGAC
GACGAGGGCT CGGTCGGTGC CTACTGGGGC GTCTACAACT TCGAGCGCCA GCCCAAGTTC
GCCTTCGAGG GACCGGTGGT GGCCATTCCC CAGTGGCGCC TGCTGGCGGT CGGCTCGGTG
GTCCTCGCCG TACTGGCCCT GGCTCTGCTG CTGATCGATG GCAGCGCGCT GCGCCAGCGC
GGACGCACCT TCCTGACCTT CGTCGCCTTC GCCTGCGGCT CGATCCTGGT GTGGATCGGC
TACGACTACA GCCAGCAGTA CAGCACCTGG TTCAGCCTCA CCGTCGGCTT CCTGCTCGCC
CTCGGTGCGC TCGGCGTGTT CATCGTGCTG CTCACCGAGG CCCACGAACT GGCCGAGACG
GTATGGACGC TCAAGCGCCG CCGGCCGTTC CCGCCGGTGA CCGCCGACGA AGCCTACCGG
CCCAAGGTGT CGATCCACGT GCCCTGCTAC AACGAACCGC CGGAGATGGT CAAGCAGACC
CTCGACGCCC TCTCGCGCCT GGACTACCCG GACTTCGAGG TGCTGGTGAT CGACAACAAC
ACCAAGGACC CAGCGGTCTG GAAGCCCCTC GAGGAGCACT GCGCGCGCCT CGGCCCGCGC
TTCAGGTTCT TCCACGTCGC GCCGCTGGCC GGCTTCAAGG GCGGCGCGCT GAACTACGTG
CTGCAGTACA CCGCGCCGGA CGCCGAAGTG GTCGCGGTGA TCGACTCCGA CTACTGCGTC
GAACGCGACT GGCTCAAGCA CATGGTGCCG CACTTCGCCG ACCCGAAGAT CGCCGTGGTG
CAGTCGCCGC AGGACTATCG CGACGACCGC GAAAGCGCTT TCAAGAAGCT CTGCTACGCC
GAATACAAGG GCTTCTTCCA TATCGGCATG ATCACCCGCA ACGACCGCGA CGCGATCATC
CAGCACGGCA CCATGACCAT GACCCGGCGT TCGGTGCTGG ACGAACTGGG CTGGGCCGAC
TGGTGCATCA CCGAGGACGC CGAGCTGGGC CTGCGGGTGT TCGAGAAGGG CCTCTCGGCC
GCCTATTCCG AACGCAGCTA CGGCAAGGGA CTGATGCCCG ACACCTTCAT CGACTTCAAG
AAGCAGCGCT TCCGCTGGGC CTACGGCGCC ATCCAGATCA TGAAGCGCCA TACCCGCAGC
CTGCTGTGGG GCAAGGAGAG CGAGCTGACC CGCGGCCAGC GCTACCACTT CCTGGCCGGC
TGGCTGCCGT GGATCGCCGA CGGGCTGAAC ATCTTCTTCA CCCTCGGCGC CTTGCTGTGG
TCGGCGGCGA TGATCATCGT CCCGCACCGG GTCGACCCGC CGTTGCTGAT CTTCGCCATC
CCGCCGCTGG CGCTGTTCTT CTTCAAGGTC GGCAAGATCC TGTTCCTCTA CCGCCGCGCG
GTGGGCGTCA ACCTCAAGGA CGCCTTCTAC GCCGCGATCG CCGGCCTGGC GCTGTCGCAC
ACCATCGCCA AGGCGGTGCT CTACGGCTTC TTCACCAGCA GCATCCCGTT CTTCCGCACA
CCGAAGATGG CGAACAACCA CGGCATCCTG GTGGCCCTGG CGGAAGCCCG CGAGGAGGTG
GTGATCATGC TGGTGCTGTG GGGCGCGGCC GCCGGCATCG CCCTGGTGCA GGGCTTCCCG
AGCAACGACG TGATCTTCTG GGTGGCGGTC CTGCTGATCC AGTCGCTGCC CTATCTGGCG
GCGCTGATCA TGGCGCTGCT GTCGTCGCAG CCGAAGAAGG TTCAGGAGGT CCCGCTCGTC
GAAGCCGTCT GA
 
Protein sequence
MSSHKFGLNL VVVVAVAALF TGIWALYNLP VTAPDWPEQI SGYSFSPFRP GQNPQENRYP 
SDDEIRADLE LLSRQTDSIR TYSVDGNLAN VPRLAEELGL RVTLGIWISQ DMERNEREIA
KAIELAKSSR SVVRVVVGNE ALFRSEITPE ALIAYIDRVR AAVKVPVTTS EQWHIWQEYP
ELGRHVDLIA AHILPYWEFV PMEDSVQFTL DRARDLKKLF PRKPLLLSEV GWPSNGRTRG
GAEATQIDQA IYLRTLVNTL NAQGYNYFVI EAFDQPWKID DEGSVGAYWG VYNFERQPKF
AFEGPVVAIP QWRLLAVGSV VLAVLALALL LIDGSALRQR GRTFLTFVAF ACGSILVWIG
YDYSQQYSTW FSLTVGFLLA LGALGVFIVL LTEAHELAET VWTLKRRRPF PPVTADEAYR
PKVSIHVPCY NEPPEMVKQT LDALSRLDYP DFEVLVIDNN TKDPAVWKPL EEHCARLGPR
FRFFHVAPLA GFKGGALNYV LQYTAPDAEV VAVIDSDYCV ERDWLKHMVP HFADPKIAVV
QSPQDYRDDR ESAFKKLCYA EYKGFFHIGM ITRNDRDAII QHGTMTMTRR SVLDELGWAD
WCITEDAELG LRVFEKGLSA AYSERSYGKG LMPDTFIDFK KQRFRWAYGA IQIMKRHTRS
LLWGKESELT RGQRYHFLAG WLPWIADGLN IFFTLGALLW SAAMIIVPHR VDPPLLIFAI
PPLALFFFKV GKILFLYRRA VGVNLKDAFY AAIAGLALSH TIAKAVLYGF FTSSIPFFRT
PKMANNHGIL VALAEAREEV VIMLVLWGAA AGIALVQGFP SNDVIFWVAV LLIQSLPYLA
ALIMALLSSQ PKKVQEVPLV EAV