Gene Avin_37860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_37860 
Symbol 
ID7762678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3830133 
End bp3831197 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content68% 
IMG OID643806652 
Producthypothetical protein 
Protein accessionYP_002800905 
Protein GI226945832 
COG category[R] General function prediction only 
COG ID[COG3489] Predicted periplasmic lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.214112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGCA GTACTCCTCT CCTCCTCGCC CTGACCGGCC TTCTGCTCGG GGCCTGCACG 
CCCAAGGAGC CCGCTCAGCA GACCAGCATC GCCCTGAGCG ACGGCGTACT GCTGCCGGCC
TACAGCGGCT GGGCCGAAGC CGACCGCCAA CTGGCGGCCA GCGCCCTCTC CTTCTGCGCC
GGCAACGAGG ACCTGCAGCA GGCACGGCAG ATCTTCCTGA CCGCCCAGAA CAGTTGGGCA
GCCCTGCAAC CCCTGCTGTT CGGGCCGCTG GCCGAGGGCA ACCTGGCCTG GCAGGTACAA
TTCTGGCCGG ACAAGAAAAA CCTGGTCGCC CGCCAGGTCG AAAACCTGCT GCAGCAGAAA
CCGCAACTGA CCCAGGCCGA CCTGGAGCAG GCCAGCGTGG TGGTCAAGGG CCTCAGCGCC
TACGAATACC TGCTGTTCGA CAACGGCCTG GACCTCACCG ACGCCACTCA GCGCCAGCGC
TACTGCCCGC TGCTGACCGC CATCGGCAAA CACCAGCAGA CCCTCTCCGC GGAAATCCTC
CAGCAGTGGC AGGGCGACGC CGGCATGGCC GTGCACCTGA AACGCTTTCC CAACAGCCGC
TACGCCGACG CCAAGGAAGC CATCGGCGAG ATCCTGCGCG CAGAGGTCAC CGCCCTCGAT
GTCCTGAAGA AGAAGCTCGG CACACCGCTC GGCCGGCAGA GCAAGGGCGT GCCGCAACCG
TTGCAGGCCG AGTCCTGGCG CAGCCAGTCC ACGCTTTCGA ACCTCGCCGC CAGCCTGGCG
ACGGCCGAGC GCCTGTGGCT CGGCGTCAAG CAGGACGGCA TCCGCAACCT GCTCGACGAG
GACCAGGCGG AACTCGCCCA GCGCCTCGAC CGGGCTTTCG GCGACAGCCG CGGGCGGCTC
GCCGCCCTGC AGCGTCCGTT CGACGAACTG CTCGCCGACA AGGCCGGACG CGACCAGTTG
AACGCCCTCT ACGACAGCTT CGACCGCCTG CACCGTCTGC ACGAGCGCGA GCTGGCCAAG
GCGCTCGACA TCCAGCTCGG CTTCAATGCC CACGACGGCG ACTGA
 
Protein sequence
MFRSTPLLLA LTGLLLGACT PKEPAQQTSI ALSDGVLLPA YSGWAEADRQ LAASALSFCA 
GNEDLQQARQ IFLTAQNSWA ALQPLLFGPL AEGNLAWQVQ FWPDKKNLVA RQVENLLQQK
PQLTQADLEQ ASVVVKGLSA YEYLLFDNGL DLTDATQRQR YCPLLTAIGK HQQTLSAEIL
QQWQGDAGMA VHLKRFPNSR YADAKEAIGE ILRAEVTALD VLKKKLGTPL GRQSKGVPQP
LQAESWRSQS TLSNLAASLA TAERLWLGVK QDGIRNLLDE DQAELAQRLD RAFGDSRGRL
AALQRPFDEL LADKAGRDQL NALYDSFDRL HRLHERELAK ALDIQLGFNA HDGD