| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_37090 |
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| Symbol | gacS |
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| ID | 7762603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 3767111 |
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| End bp | 3769828 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643806576 |
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| Product | alginate regulatory hybrid histidine protein kinase GacS |
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| Protein accession | YP_002800830 |
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| Protein GI | 226945757 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0555684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACCC TGCTGCCCAG TTGCCTGCTG GCACTGGTCC TGGGTAGCTA TTTCACCTGG
CAGCAGTTGG CCGAGATGCA CGGCAACCTG GTGGGACGCG GTCAGTTGAT CGTCCAGCAA
CTGGCTCCGC TGGCCGCTCC CGCCCTGGCG CAGAACTACC ACAATCGCCT GCAGCGTATC
GCCAACCGGG TACTGGATCA GACCGACATC CGTGCGGTGA GCTTTCTCGA CAGCGAACTG
GGCACCATCG TGCATGCCGG CCCGAGCCTC AACGGCCCGC TGCCGCCCCA GGACCCGACC
CAACTGACCA TGGTCCGCGA CAACAGCGCC ACCCACCTGC TGATGCCGGT GCTCGGCTAC
CACCAGAACC TGGCCAGCGG CAGCAACGAC CGGGACGACC ACCTGCTCGG CTGGATCGCC
CTGGAGATAT CGCACCACAA CGCTCTGCTG CAGGGCTACC GCAACCTGCT GGCCAGCCTG
CTGCTGATCC TCTCCGTGCT GCTGGTCAGC GCCTTCCTCG CCCTGCGCGT GGGGCGCTCG
ATCAGCGATC CGCTGCGGCG CATCCAGCAG GGCGTGTCGC AACTGCGCGA CGGCCATCTG
GAAACCCGCC TGCCATCCCT GCGCAGCCAC GAACTGGACG AGTTGGCCGC CGGCATCAAC
CGCATGGCCG AAGTCATGCA GCACGCCCAG GAGGAGATGC AGAACAGCAT CGACCAGGCC
ACCGAGGACG TGCGCCAGAA CCTGGAAACC ATCGAGATCC AGAACATCGA ACTGGACATG
GTGCGCCGCG AGGCCCTGGA GGCGAGCCGG ATCAAATCCG AATTCCTCGC CAACATGAGC
CACGAGATCC GCACCCCGCT GAACGGCATC ATCGGTTTCA CCAACCTGTT GCAGAAATGC
GAGCTGACGC CCCGCCAGCA CGACTACCTG AACACCATCC AGAAGTCCGC CGACAGTCTG
CTCGACATCA TCAACGAGAT CCTCGACTTC TCGAAGATCG AGGCCGGCAA GCTGGTTCTC
GAACACACCC CCTTCAACCT GCGCGAACTC ATCCAGGACA CCCTCACCAT CCTCGCCCCG
GCGGCCCACG CCAAGCACCT CGAACTGGTC AGCCTGATCT ATCGCGACAC GCCCCTGGCG
CTGAACGGCG ATCCCCAGCG GCTCCGCCAG GTCCTCACCA ACCTGATCAG CAACGCCATC
AAGTTCACCA ACGAAGGCAC CATCGCCGTG CGCGCCATGG TCGAGGACAT CGGCGAGGAG
TTCGCCCAGT TGCGGATCAG CGTGCACGAC ACCGGCATCG GCCTGTCCCA GGAAGACCTG
AACGCCCTGT TCCAGGCCTT CAGCCAGGCC GACAATTCGC TGACCCGCCA GGCCGGCGGC
ACCGGCCTCG GCCTGGTCAT CTCCAAGCGC CTGATCGAGC AGATGGGGGG CGAGATAGGC
GTCAACAGCG TGCCGGGCGA AGGCTCCGAG TTCTGGATAC GCCTGTCCCT GCCGCTCGAC
GATCACAGCG AGGACGAGCC GCCGACCGCC CTGCACGGCC ACCGGGTGGC GCTGCTCGAA
CAACACGAAC TGGCCCGCCA GTCGATCCAG CACCAGTTGG AGGACTGCGG CCTGGAGGTA
CAGCCCTTCG CCGAACTCGA CAGCCTGCTG GCCGGTGTCG CCGCCGCACG CCAGGAGGAA
CGGCCGGTCG GCCTGGCGGT GCTCGGGGTG ACCAGCCGCG ACACCAGCGC CGAAGAACTG
GCCCAGCGCA TCGCCGACCT CGAACGGCTC GGCTGCAAGT GCCTGGTGCT CTGCCCCACC
ACCGAACAGA TGTTCTACCA GGAGGTCCTG CCGGAGGCGC AGATCCAGTT GCAGAGCAAG
CCGGCGCACC GCGACAAGCT GCAGGCGGCC CTCGGCGAAC TGCTCACCCC CCAGCCGACC
GGCTCGCAGA CACTCGGCCC GCTGGGCAAC CGCGCGCCGC GCCTGCTCTG CGTCGACGAC
AACCCGGCCA ACCTGCTGCT GGTACAGACC CTGCTCGGCG ACATGGGTGC CGCGGTCACC
GTGGCCGACA GCGGCCACGC CGCGGTGGAG GCCGCCCAGC GGGAACGCTT CGACCTGATC
TTCATGGACG TGCAGATGCC CGGCATGGAC GGCCGCCAAG CCACCCGGGC GATTCGCCAG
TGGGAGGCCG GACAGCCGGA ACAGCGCCAT ACGCCGATCA TCGCCCTCAC CGCCCACGCC
CTGGCCAACG AACGGCGCGC CCTGCTGCAG AGCGGCATGG ACGACTACAT GACCAAACCG
ATCAACGAGC GCCAGTTGGC TCAGGTCGTG CACAAATGGA CCCGGCTGCA CCTGCGCTCG
CCCGGCGCCC AGCAGGTCCA CGAGGTCCAG CCGGCGTCCA TCGGCCACCT CAGCGTGCTG
GACTCCGAGG AAGGCCTGCG CCTGGCCGCC GGCAAGCCCG ACTTGGCCGC CGACATGCTG
AGCATGCTGC TGGCCTCGCT GGATGCCGAC CGCCAGGCGA TCCACCAGGC ACGTCGGGAC
GGCGACCGCG CCGCGCTGAT CGAACGAGTG CATCGCCTGC ACGGGGCCAC CCGCTACTGC
GGCGTTCCCC AGTTGCGCGC CGCCTGCCAG CACAGCGAAA CCCTGCTCAA ACAGCACGCT
CCGGCGGCCG ATACCGCCCT GGACGAACTC GACGCGGCCA TTCTGCGCCT GGCCGGCGAG
GCGAAATTCG GCGCCTGA
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| Protein sequence | MLTLLPSCLL ALVLGSYFTW QQLAEMHGNL VGRGQLIVQQ LAPLAAPALA QNYHNRLQRI
ANRVLDQTDI RAVSFLDSEL GTIVHAGPSL NGPLPPQDPT QLTMVRDNSA THLLMPVLGY
HQNLASGSND RDDHLLGWIA LEISHHNALL QGYRNLLASL LLILSVLLVS AFLALRVGRS
ISDPLRRIQQ GVSQLRDGHL ETRLPSLRSH ELDELAAGIN RMAEVMQHAQ EEMQNSIDQA
TEDVRQNLET IEIQNIELDM VRREALEASR IKSEFLANMS HEIRTPLNGI IGFTNLLQKC
ELTPRQHDYL NTIQKSADSL LDIINEILDF SKIEAGKLVL EHTPFNLREL IQDTLTILAP
AAHAKHLELV SLIYRDTPLA LNGDPQRLRQ VLTNLISNAI KFTNEGTIAV RAMVEDIGEE
FAQLRISVHD TGIGLSQEDL NALFQAFSQA DNSLTRQAGG TGLGLVISKR LIEQMGGEIG
VNSVPGEGSE FWIRLSLPLD DHSEDEPPTA LHGHRVALLE QHELARQSIQ HQLEDCGLEV
QPFAELDSLL AGVAAARQEE RPVGLAVLGV TSRDTSAEEL AQRIADLERL GCKCLVLCPT
TEQMFYQEVL PEAQIQLQSK PAHRDKLQAA LGELLTPQPT GSQTLGPLGN RAPRLLCVDD
NPANLLLVQT LLGDMGAAVT VADSGHAAVE AAQRERFDLI FMDVQMPGMD GRQATRAIRQ
WEAGQPEQRH TPIIALTAHA LANERRALLQ SGMDDYMTKP INERQLAQVV HKWTRLHLRS
PGAQQVHEVQ PASIGHLSVL DSEEGLRLAA GKPDLAADML SMLLASLDAD RQAIHQARRD
GDRAALIERV HRLHGATRYC GVPQLRAACQ HSETLLKQHA PAADTALDEL DAAILRLAGE
AKFGA
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