Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_37090 |
Symbol | gacS |
ID | 7762603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3767111 |
End bp | 3769828 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643806576 |
Product | alginate regulatory hybrid histidine protein kinase GacS |
Protein accession | YP_002800830 |
Protein GI | 226945757 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0555684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACCC TGCTGCCCAG TTGCCTGCTG GCACTGGTCC TGGGTAGCTA TTTCACCTGG CAGCAGTTGG CCGAGATGCA CGGCAACCTG GTGGGACGCG GTCAGTTGAT CGTCCAGCAA CTGGCTCCGC TGGCCGCTCC CGCCCTGGCG CAGAACTACC ACAATCGCCT GCAGCGTATC GCCAACCGGG TACTGGATCA GACCGACATC CGTGCGGTGA GCTTTCTCGA CAGCGAACTG GGCACCATCG TGCATGCCGG CCCGAGCCTC AACGGCCCGC TGCCGCCCCA GGACCCGACC CAACTGACCA TGGTCCGCGA CAACAGCGCC ACCCACCTGC TGATGCCGGT GCTCGGCTAC CACCAGAACC TGGCCAGCGG CAGCAACGAC CGGGACGACC ACCTGCTCGG CTGGATCGCC CTGGAGATAT CGCACCACAA CGCTCTGCTG CAGGGCTACC GCAACCTGCT GGCCAGCCTG CTGCTGATCC TCTCCGTGCT GCTGGTCAGC GCCTTCCTCG CCCTGCGCGT GGGGCGCTCG ATCAGCGATC CGCTGCGGCG CATCCAGCAG GGCGTGTCGC AACTGCGCGA CGGCCATCTG GAAACCCGCC TGCCATCCCT GCGCAGCCAC GAACTGGACG AGTTGGCCGC CGGCATCAAC CGCATGGCCG AAGTCATGCA GCACGCCCAG GAGGAGATGC AGAACAGCAT CGACCAGGCC ACCGAGGACG TGCGCCAGAA CCTGGAAACC ATCGAGATCC AGAACATCGA ACTGGACATG GTGCGCCGCG AGGCCCTGGA GGCGAGCCGG ATCAAATCCG AATTCCTCGC CAACATGAGC CACGAGATCC GCACCCCGCT GAACGGCATC ATCGGTTTCA CCAACCTGTT GCAGAAATGC GAGCTGACGC CCCGCCAGCA CGACTACCTG AACACCATCC AGAAGTCCGC CGACAGTCTG CTCGACATCA TCAACGAGAT CCTCGACTTC TCGAAGATCG AGGCCGGCAA GCTGGTTCTC GAACACACCC CCTTCAACCT GCGCGAACTC ATCCAGGACA CCCTCACCAT CCTCGCCCCG GCGGCCCACG CCAAGCACCT CGAACTGGTC AGCCTGATCT ATCGCGACAC GCCCCTGGCG CTGAACGGCG ATCCCCAGCG GCTCCGCCAG GTCCTCACCA ACCTGATCAG CAACGCCATC AAGTTCACCA ACGAAGGCAC CATCGCCGTG CGCGCCATGG TCGAGGACAT CGGCGAGGAG TTCGCCCAGT TGCGGATCAG CGTGCACGAC ACCGGCATCG GCCTGTCCCA GGAAGACCTG AACGCCCTGT TCCAGGCCTT CAGCCAGGCC GACAATTCGC TGACCCGCCA GGCCGGCGGC ACCGGCCTCG GCCTGGTCAT CTCCAAGCGC CTGATCGAGC AGATGGGGGG CGAGATAGGC GTCAACAGCG TGCCGGGCGA AGGCTCCGAG TTCTGGATAC GCCTGTCCCT GCCGCTCGAC GATCACAGCG AGGACGAGCC GCCGACCGCC CTGCACGGCC ACCGGGTGGC GCTGCTCGAA CAACACGAAC TGGCCCGCCA GTCGATCCAG CACCAGTTGG AGGACTGCGG CCTGGAGGTA CAGCCCTTCG CCGAACTCGA CAGCCTGCTG GCCGGTGTCG CCGCCGCACG CCAGGAGGAA CGGCCGGTCG GCCTGGCGGT GCTCGGGGTG ACCAGCCGCG ACACCAGCGC CGAAGAACTG GCCCAGCGCA TCGCCGACCT CGAACGGCTC GGCTGCAAGT GCCTGGTGCT CTGCCCCACC ACCGAACAGA TGTTCTACCA GGAGGTCCTG CCGGAGGCGC AGATCCAGTT GCAGAGCAAG CCGGCGCACC GCGACAAGCT GCAGGCGGCC CTCGGCGAAC TGCTCACCCC CCAGCCGACC GGCTCGCAGA CACTCGGCCC GCTGGGCAAC CGCGCGCCGC GCCTGCTCTG CGTCGACGAC AACCCGGCCA ACCTGCTGCT GGTACAGACC CTGCTCGGCG ACATGGGTGC CGCGGTCACC GTGGCCGACA GCGGCCACGC CGCGGTGGAG GCCGCCCAGC GGGAACGCTT CGACCTGATC TTCATGGACG TGCAGATGCC CGGCATGGAC GGCCGCCAAG CCACCCGGGC GATTCGCCAG TGGGAGGCCG GACAGCCGGA ACAGCGCCAT ACGCCGATCA TCGCCCTCAC CGCCCACGCC CTGGCCAACG AACGGCGCGC CCTGCTGCAG AGCGGCATGG ACGACTACAT GACCAAACCG ATCAACGAGC GCCAGTTGGC TCAGGTCGTG CACAAATGGA CCCGGCTGCA CCTGCGCTCG CCCGGCGCCC AGCAGGTCCA CGAGGTCCAG CCGGCGTCCA TCGGCCACCT CAGCGTGCTG GACTCCGAGG AAGGCCTGCG CCTGGCCGCC GGCAAGCCCG ACTTGGCCGC CGACATGCTG AGCATGCTGC TGGCCTCGCT GGATGCCGAC CGCCAGGCGA TCCACCAGGC ACGTCGGGAC GGCGACCGCG CCGCGCTGAT CGAACGAGTG CATCGCCTGC ACGGGGCCAC CCGCTACTGC GGCGTTCCCC AGTTGCGCGC CGCCTGCCAG CACAGCGAAA CCCTGCTCAA ACAGCACGCT CCGGCGGCCG ATACCGCCCT GGACGAACTC GACGCGGCCA TTCTGCGCCT GGCCGGCGAG GCGAAATTCG GCGCCTGA
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Protein sequence | MLTLLPSCLL ALVLGSYFTW QQLAEMHGNL VGRGQLIVQQ LAPLAAPALA QNYHNRLQRI ANRVLDQTDI RAVSFLDSEL GTIVHAGPSL NGPLPPQDPT QLTMVRDNSA THLLMPVLGY HQNLASGSND RDDHLLGWIA LEISHHNALL QGYRNLLASL LLILSVLLVS AFLALRVGRS ISDPLRRIQQ GVSQLRDGHL ETRLPSLRSH ELDELAAGIN RMAEVMQHAQ EEMQNSIDQA TEDVRQNLET IEIQNIELDM VRREALEASR IKSEFLANMS HEIRTPLNGI IGFTNLLQKC ELTPRQHDYL NTIQKSADSL LDIINEILDF SKIEAGKLVL EHTPFNLREL IQDTLTILAP AAHAKHLELV SLIYRDTPLA LNGDPQRLRQ VLTNLISNAI KFTNEGTIAV RAMVEDIGEE FAQLRISVHD TGIGLSQEDL NALFQAFSQA DNSLTRQAGG TGLGLVISKR LIEQMGGEIG VNSVPGEGSE FWIRLSLPLD DHSEDEPPTA LHGHRVALLE QHELARQSIQ HQLEDCGLEV QPFAELDSLL AGVAAARQEE RPVGLAVLGV TSRDTSAEEL AQRIADLERL GCKCLVLCPT TEQMFYQEVL PEAQIQLQSK PAHRDKLQAA LGELLTPQPT GSQTLGPLGN RAPRLLCVDD NPANLLLVQT LLGDMGAAVT VADSGHAAVE AAQRERFDLI FMDVQMPGMD GRQATRAIRQ WEAGQPEQRH TPIIALTAHA LANERRALLQ SGMDDYMTKP INERQLAQVV HKWTRLHLRS PGAQQVHEVQ PASIGHLSVL DSEEGLRLAA GKPDLAADML SMLLASLDAD RQAIHQARRD GDRAALIERV HRLHGATRYC GVPQLRAACQ HSETLLKQHA PAADTALDEL DAAILRLAGE AKFGA
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