Gene Avin_35900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35900 
Symbol 
ID7762484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3661086 
End bp3662264 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content68% 
IMG OID643806457 
Productchloramphenicol resistance protein 
Protein accessionYP_002800712 
Protein GI226945639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGGAG GCTTCGCCAT CGGCACAACC GAGTACGCGA GCGTCGGGGT GCTGCCGCAG 
ATCGCCGATG ACTTCGGGGT CAACCTGGCG CGCGCCGGGC TGGTCGTCAG CGGCTATGCG
CTGGGCGTCA GCTTCGGATC GCCGATCCTC GCCGCCCTGA CGGGAAGCCT GTCGCGCAAG
ACGTTGATGC TGGCGGTGAT GGCCTTGTTC GTCCTCGCCA ATGCGGCCGC TGCGGTGAGC
GCAAGCTACG AATTCCTCAT CGGCGCGCGC GTCGTCTCCG CCTTGCCACA CGGCATCTTC
TTCGGCGTCG GTGCTGCGAT CGCCGCGAGC CTGGTGGGGG AAGACCGCCG AGCCTCGGCG
GTGGCGATCG TGTTCGGTGG CTTGACCATC GCGGTCGCGG CAGGTGTGCC GATTGCGACC
GTCATCGGCC AGCGCCTGGG CTGGCCGATG GCCTACTGGT TCGTCGCGGC CATCGGTCTG
GTGTCACTGG TGGCGATGGC GGCCACCTTG CCCCGCAGGA TCGACATCGC GCCGGCCGGC
AGTCTCATCG AGCAGGTCAA GGTGCTGGGC AGCGGGCGCC TGCTGATCGC GTTCGGCATG
AACTTCTGTG CCTGGGGCGG CACCTTCGTC GCCTTCGCCT ATCTGCCCAG CATCCTGGCC
GACATCACCG GCTTCGGCCC GAACGGCGTG GCGTGGATGC TGGCCCTCTA CGGTGTCTCG
GTGATCGTCG GCAATTTCCT CGGCGGGCGG GTGTCCGACA AGAAGGTCGT GCCCGCGCTG
GCGCTGATGC TCAGCGCGCA GGCGGCGGTG TTGTTGATCT TCACCTTCAC GGCCCTGTCG
ATGCTCGGCT CGATCCTGAC GCTCGGTGTG CTGGGCGCGC TGATGTTCTG CAACGTGCCG
GGCCTGGCGC TCTACGTCGT GCAGCTTGCC CAGCGCCATC GGCCGGGCAA CGTGGACATC
GCCTCGACCA TCAATGTGTC GGCCGCTAAT GCCGGCATCG CGCTCGGCGC CTTCATCGGC
GGGCTGGTGG CGGATTCCCG GCTGGGGCTG GGGGCGACGC CTTGGGTTGG TGCGGTCATG
GTCGGCATTG GCCTGCTGCT GACGATGTGG AGCGGCTGGC TCGACCGCAG AGAGCCAAGT
GCAAGTTCAG TGCTCTCGAA CGCTGTTCGA GAGCACTGA
 
Protein sequence
MVGGFAIGTT EYASVGVLPQ IADDFGVNLA RAGLVVSGYA LGVSFGSPIL AALTGSLSRK 
TLMLAVMALF VLANAAAAVS ASYEFLIGAR VVSALPHGIF FGVGAAIAAS LVGEDRRASA
VAIVFGGLTI AVAAGVPIAT VIGQRLGWPM AYWFVAAIGL VSLVAMAATL PRRIDIAPAG
SLIEQVKVLG SGRLLIAFGM NFCAWGGTFV AFAYLPSILA DITGFGPNGV AWMLALYGVS
VIVGNFLGGR VSDKKVVPAL ALMLSAQAAV LLIFTFTALS MLGSILTLGV LGALMFCNVP
GLALYVVQLA QRHRPGNVDI ASTINVSAAN AGIALGAFIG GLVADSRLGL GATPWVGAVM
VGIGLLLTMW SGWLDRREPS ASSVLSNAVR EH