Gene Avin_35870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_35870 
Symbol 
ID7762481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3657573 
End bp3658799 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content71% 
IMG OID643806454 
Productmajor facilitator family transporter 
Protein accessionYP_002800709 
Protein GI226945636 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0848172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG TTGCCGATGA CCGCCTGCCG CTGGTGTCAC TGCTGGCACT GGCGATGGCG 
GCCTTCATCA CCATCCTGAC CGAAGCGCTG CCGGCCGGTC TGCTGCCGCA GATGGCACAG
GGCCTGATGG TGTCCGAGGC CTGGGTCGGC CAGACCGTCA CCATCTATGC CATCGGTTCG
CTGGTGGCGG CGATTCCGCT GACCGCCGCG ACGCAGGGCG TGCGCCGCCG CCCGCTGCTG
CTGGCGGCCA TCGCCGGTTT CGTCGTCGCC AATACCGTTA CGACGTTCTC CGGCAGCTAT
GTCCTGACGA TGGTGGCGCG CTTCCTGGCG GGTGTGTCGG CCGGGCTGCT GTGGGCGCTG
CTGGCGGGCT ATGCCGCGCG CATGGTGCCC GAGCACAAGA AGGGCCGCGC CATCGCCATT
GCGATGGTCG GCACGCCGCT GGCGCTGTCG CTGGGCGTGC CGGCCGGCAC CTTCCTCGGC
AACCTGGTCG GCTGGCGGAC GTGCTTCGGC ATCATGAGCG CGTTGGCGCT GGTGCTCATG
GTGTGGGTGC GCGTCCAGGT GCCGGACTTC GCCGGGCAGG CAGCGGGCAA GCGGCTGCCG
CTGGGCCGTG TTTTCACCAT CGCCGGCGTG CGCCCGGTGC TGTTCGTGGT GCTGGCGTTC
GTGCTGGCGC ACAACATCCT CTACACCTAC ATCGCACCGT TCCTGGCGGC GGCGGGCATG
GCCGAGCGGA CGGACCTGGT GCTGCTGGTG TTCGGCGTCA CCGCGCTGCT GGGCATCTGG
ATCGTCGGCG TGCTGATCGA CCGCCATCTG CGTGCGCTGA CGCTCGCCAG CACCGTCGTG
TTCGGCCTGT CCGCGCTGGC GCTGGGCGTG GCGGGCGATG CGCCTGCCGT GGTCTATGCG
GCGGTGGCCG CCTGGGGACT CGCCTTTGGT GGTGCGGCGA CGCTGTTCCA GACGGCGCTG
GCCAAGACGG CGGGCGAAGC GGCGGACGTC GCCCAGTCCA TGCTGGTCAC CGCCTGGAAC
ACGGCGATTG CCGGGGGTGG CATCGTCGGC GGCGTGCTGC TCGAACGGCT GGGCGTCGGC
GCGTTCGCAC CGGCCTTGCT GGTGTTGCTG GCGGCGACGC TGGTGGTGGT GTGGGCGGCT
AGGCGGCATG GCTTTCCCGC TCCGGCGGGT GCGGCCGGGT CATGCCCGGC AACCACGCCC
GATCGACGGA CAGAAGTGCA ACCATGA
 
Protein sequence
MSAVADDRLP LVSLLALAMA AFITILTEAL PAGLLPQMAQ GLMVSEAWVG QTVTIYAIGS 
LVAAIPLTAA TQGVRRRPLL LAAIAGFVVA NTVTTFSGSY VLTMVARFLA GVSAGLLWAL
LAGYAARMVP EHKKGRAIAI AMVGTPLALS LGVPAGTFLG NLVGWRTCFG IMSALALVLM
VWVRVQVPDF AGQAAGKRLP LGRVFTIAGV RPVLFVVLAF VLAHNILYTY IAPFLAAAGM
AERTDLVLLV FGVTALLGIW IVGVLIDRHL RALTLASTVV FGLSALALGV AGDAPAVVYA
AVAAWGLAFG GAATLFQTAL AKTAGEAADV AQSMLVTAWN TAIAGGGIVG GVLLERLGVG
AFAPALLVLL AATLVVVWAA RRHGFPAPAG AAGSCPATTP DRRTEVQP