Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_35870 |
Symbol | |
ID | 7762481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3657573 |
End bp | 3658799 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643806454 |
Product | major facilitator family transporter |
Protein accession | YP_002800709 |
Protein GI | 226945636 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0848172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG TTGCCGATGA CCGCCTGCCG CTGGTGTCAC TGCTGGCACT GGCGATGGCG GCCTTCATCA CCATCCTGAC CGAAGCGCTG CCGGCCGGTC TGCTGCCGCA GATGGCACAG GGCCTGATGG TGTCCGAGGC CTGGGTCGGC CAGACCGTCA CCATCTATGC CATCGGTTCG CTGGTGGCGG CGATTCCGCT GACCGCCGCG ACGCAGGGCG TGCGCCGCCG CCCGCTGCTG CTGGCGGCCA TCGCCGGTTT CGTCGTCGCC AATACCGTTA CGACGTTCTC CGGCAGCTAT GTCCTGACGA TGGTGGCGCG CTTCCTGGCG GGTGTGTCGG CCGGGCTGCT GTGGGCGCTG CTGGCGGGCT ATGCCGCGCG CATGGTGCCC GAGCACAAGA AGGGCCGCGC CATCGCCATT GCGATGGTCG GCACGCCGCT GGCGCTGTCG CTGGGCGTGC CGGCCGGCAC CTTCCTCGGC AACCTGGTCG GCTGGCGGAC GTGCTTCGGC ATCATGAGCG CGTTGGCGCT GGTGCTCATG GTGTGGGTGC GCGTCCAGGT GCCGGACTTC GCCGGGCAGG CAGCGGGCAA GCGGCTGCCG CTGGGCCGTG TTTTCACCAT CGCCGGCGTG CGCCCGGTGC TGTTCGTGGT GCTGGCGTTC GTGCTGGCGC ACAACATCCT CTACACCTAC ATCGCACCGT TCCTGGCGGC GGCGGGCATG GCCGAGCGGA CGGACCTGGT GCTGCTGGTG TTCGGCGTCA CCGCGCTGCT GGGCATCTGG ATCGTCGGCG TGCTGATCGA CCGCCATCTG CGTGCGCTGA CGCTCGCCAG CACCGTCGTG TTCGGCCTGT CCGCGCTGGC GCTGGGCGTG GCGGGCGATG CGCCTGCCGT GGTCTATGCG GCGGTGGCCG CCTGGGGACT CGCCTTTGGT GGTGCGGCGA CGCTGTTCCA GACGGCGCTG GCCAAGACGG CGGGCGAAGC GGCGGACGTC GCCCAGTCCA TGCTGGTCAC CGCCTGGAAC ACGGCGATTG CCGGGGGTGG CATCGTCGGC GGCGTGCTGC TCGAACGGCT GGGCGTCGGC GCGTTCGCAC CGGCCTTGCT GGTGTTGCTG GCGGCGACGC TGGTGGTGGT GTGGGCGGCT AGGCGGCATG GCTTTCCCGC TCCGGCGGGT GCGGCCGGGT CATGCCCGGC AACCACGCCC GATCGACGGA CAGAAGTGCA ACCATGA
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Protein sequence | MSAVADDRLP LVSLLALAMA AFITILTEAL PAGLLPQMAQ GLMVSEAWVG QTVTIYAIGS LVAAIPLTAA TQGVRRRPLL LAAIAGFVVA NTVTTFSGSY VLTMVARFLA GVSAGLLWAL LAGYAARMVP EHKKGRAIAI AMVGTPLALS LGVPAGTFLG NLVGWRTCFG IMSALALVLM VWVRVQVPDF AGQAAGKRLP LGRVFTIAGV RPVLFVVLAF VLAHNILYTY IAPFLAAAGM AERTDLVLLV FGVTALLGIW IVGVLIDRHL RALTLASTVV FGLSALALGV AGDAPAVVYA AVAAWGLAFG GAATLFQTAL AKTAGEAADV AQSMLVTAWN TAIAGGGIVG GVLLERLGVG AFAPALLVLL AATLVVVWAA RRHGFPAPAG AAGSCPATTP DRRTEVQP
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