Gene Avin_34170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_34170 
Symbol 
ID7762312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp3489889 
End bp3490506 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID643806279 
ProductSporulation related repeat protein 
Protein accessionYP_002800541 
Protein GI226945468 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGTG CCTTGGTGAT GCTGGCACTG GCGGTGATCT TCCTGCCGAT GCTGTTCACC 
CGCGAGGACG AGGTGCGGCA GGTGGTGGTC GAGGCGCCAC CCATGCCGGA GGCCCCGCCT 
GCGCCGAAAG TCGAGCTGGA GCCGGTTGCG GTTCCGGAGC CGGTGGTTCT GCCGGAGGAG 
CCGCAGTCCG TTCCGGTGGT AGCCGGCGCA CCGGCGGCAG CCGTACCGAG CGTTCCCCCT 
GCTGCCCCGG CCGTTTCCGC CAAGGCGCCA GCCAAGCCCA CGCCGCCGCC GGCCAAGCCT 
CAGGCTGCCG CTCCCACGCC GACTCCGCCG CCGACGCAGG CCAAGGCAGC CGAGGCAAGC 
CGCCTGGATG CCAACAGCCT GCCCGTCGCT TGGTCGATCC AATTGGCCAG CCTGTCCAAT 
ACCGCCAATG CCCAGGCCTT GCAGAAGACC CTGCGCGGTC AGGGCTACAA CGCCTATATC 
CGCCATGTGG ATGGGATGAA CCGGATCTAC GTCGGGCCGG TCGCCGAGCG GAGCGAAGCC 
AACCGTCTGC GCGACCAACT CAAGCGGCAG CACAATCTCA GCGGCTTCGT CGTGCGTTTC 
CAGCCCGAGC GCGGCTGA
 
Protein sequence
MIGALVMLAL AVIFLPMLFT REDEVRQVVV EAPPMPEAPP APKVELEPVA VPEPVVLPEE 
PQSVPVVAGA PAAAVPSVPP AAPAVSAKAP AKPTPPPAKP QAAAPTPTPP PTQAKAAEAS 
RLDANSLPVA WSIQLASLSN TANAQALQKT LRGQGYNAYI RHVDGMNRIY VGPVAERSEA 
NRLRDQLKRQ HNLSGFVVRF QPERG