Gene Avin_32180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_32180 
Symbol 
ID7762117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3312151 
End bp3313320 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID643806090 
Productacyl-CoA dehydrogenase protein 
Protein accessionYP_002800354 
Protein GI226945281 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TGAATCCTCT TCTCGAAAAT CTGAATATCA TTCTCCCGCA AATTGCCAGC 
AATGCCGTTC GAGCCGAAAA GGAGCGGATG GTTCCCGAAG AAAACATCTC GTTGCTCAAG
AGTATCGGCA TGCATCGCGC CTTTCAGCCA AAGGCTTACG GCGGAATGGA GATTTCTCTG
CCGGAGTTTG CCGATTGCGT TGCCATGCTT GCTGGAGCCT GCGGTGGAAC CGCCTGGGCT
TTCAGTCTGT TGTGTACCCA TAGCCACCAG TTGGCGATGT TCTCGAAACA ATTGCAGGAC
GAGATTTGGG GCGAGAATCC GGACGCAACG GCCAGCAGCA GTATCGCGCC CTTCGGTCGT
ATCGAGGAAA CCGAGGGTGG GGTTATTCTC AACGGGGAAA TGGGCTGGAG CAGTGGTTGC
GATCATGCCG AGTGGGCGAT CGTCGGATTT CGCCGCAAGA ACGCCGAAGG CGAACTGATC
TATAGCTTTG GCGTGATACC GCGCCGTGAC TACGAAATTC GTGATGACTG GTTTTCCGTC
GGGATGCGGA GCAGTGGTTC CAAGACCTTG GTCATCAAGG ACGCTTTTGT CCCCAATCAT
CGGATAGAGG CGGCCAAAGA TATGATGGAG GGCCGCTCCA AAGGGTACGG CCTGTATCCG
GACAGCAAGA TTTTTTACAC GCCCTATCGT CCTTATTTCG CCAGTGGGTT CGCCGCAATC
AGTCTGGGTG TGGCCGAACG CATGCTGGCT GCTTTCCAGG AGAAGACCAA GAATCGTGTC
CGCGCCTATA CCGGTGCCAA TGTCGGTACT GCCACGCCGG CATTGATGCG GTTGGCAGAG
TCGACCCACC AAGTTGCCGC AGCGCGCGCC TTTCTCGAAA AAACTTGGCA AGAGCACGCC
GAATATGGGG AACGCCATCA GTATCCGAGT CGTGAGACGC TCGCCTTCTG GCGAACCAAT
CAGGCTTATG CGGTGAAAAT GTGCATTCAG GCGGTCGATC GCCTGTTCGG GGCCGCCGGT
GCGACGAGTT GGTTCGAAGA TAACGAAATG CAGCGCCTTT TCCGCGACTC GCACATGACC
GGTGCTCATG CTTATACCGA CTACGATGTT TGCGCCCAGA TCCTAGGCAG GGAACTCATG
GGTCTTGAGC CCGACCCGAC CATGGTCTGA
 
Protein sequence
MKKLNPLLEN LNIILPQIAS NAVRAEKERM VPEENISLLK SIGMHRAFQP KAYGGMEISL 
PEFADCVAML AGACGGTAWA FSLLCTHSHQ LAMFSKQLQD EIWGENPDAT ASSSIAPFGR
IEETEGGVIL NGEMGWSSGC DHAEWAIVGF RRKNAEGELI YSFGVIPRRD YEIRDDWFSV
GMRSSGSKTL VIKDAFVPNH RIEAAKDMME GRSKGYGLYP DSKIFYTPYR PYFASGFAAI
SLGVAERMLA AFQEKTKNRV RAYTGANVGT ATPALMRLAE STHQVAAARA FLEKTWQEHA
EYGERHQYPS RETLAFWRTN QAYAVKMCIQ AVDRLFGAAG ATSWFEDNEM QRLFRDSHMT
GAHAYTDYDV CAQILGRELM GLEPDPTMV