Gene Avin_31260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_31260 
Symbol 
ID7762026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3231526 
End bp3232719 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID643806001 
ProductTranscriptional regulator, LysR family 
Protein accessionYP_002800265 
Protein GI226945192 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCG CCGAATATCC CAACCTGATG CAGATTCGCG CCTTCGTGCG AGTGGCCGAG 
CTGGGCAGCG TGTCCAGGGC TTCCAGGGTG CTCTACCGGG CGCAATCGGT GGTCACCCGG
GCGATCGCGG ATCTCGAGAA ACGTCTCGGC GTCGTGCTGT TCGAACGCCA CGCCAACGGC
ATGCGGCTGA CCGACCACGG CAGGCACGTC CTGCCCAGGG CGCAGCAGAC GCTCGCCGAG
ATAGCGATGG TCCCCCAGGT GCTGGGAAAC ACCGCCGAGC CGCTCTATCT GCTGCACGCC
GGCCGGCTGG AGCTGTTCGT GAAGCTCTGC GAGACCCGCC ACATGCAAAC CGTGGCCAAC
GCTTTCGGTC TGACCCAGCC GGCGGTGAGC GCGGCGCTCA AGGTCCTGGA GAGCGGCTGC
GGGCATCTTC TGTTCGAGCG CACGCCCCAC GGCCTGCAGC CGACCCGGAG CAGCGAAGAA
ATCCTGCTCC ATATCCGCCG GGCGCTGAAC GAGCTGCGCC ATATCGATGC GGACATCGCC
GCCCTGTGCG GCACGCTGCA GGGCAGGGTC AGCGTGGGGG CCCTGCCGCT CGGGCGAACC
CGCATCCTGC CCGAGGCCAT CGTCCGCCTG ACCACAGCCC ATCCGGGGGT GCGCGTGGCG
ACCATCGAAA GCCCCTTCGA TCTGCTGGCC ACCGAACTGC GCGCCGGCGA CATCGACTTC
GTGCTCGGCG CCCTGCGGCC TTCCGAATAC GCCAGCGATC TGCACGGCGA GCGGCTGCTG
AGCGAGGATC TGGTGGTGCT GGCGCGGCGG GACCATCCGC TGTTGCGCCG GGATATCGCG
CCGAGCGATC TCGGCCGGGC CCGCTGGGTG CTGCCGCGAG CCGGCGCGCC CGCCCGGCAG
CAGCTCGACG CCTGCCTCGC CGAACTCGGC GTCGGCGCTC CCCGGCCCAT CGTGGAGACG
GGGGATCTGG CGATCATCCG TGGCCTGCTC CTGCAGTCCG ACATGATCGC CGCCGTTTCG
GCGCATCAAC TGGAATACGA AATCGCCGCC GGCGAGCTGT GGCCCTTGCC CCTGCAACTG
CGTGGCACGA ACCGCGCCAT CGGCCTGATC TACCGCACCG GCTGCCGGCA TTCGCCGCCG
GCCGAGGCCC TGATGCGACA GGTGCGCGAA GTCGCCGGAG AGCTGGGGGC CTGA
 
Protein sequence
MSFAEYPNLM QIRAFVRVAE LGSVSRASRV LYRAQSVVTR AIADLEKRLG VVLFERHANG 
MRLTDHGRHV LPRAQQTLAE IAMVPQVLGN TAEPLYLLHA GRLELFVKLC ETRHMQTVAN
AFGLTQPAVS AALKVLESGC GHLLFERTPH GLQPTRSSEE ILLHIRRALN ELRHIDADIA
ALCGTLQGRV SVGALPLGRT RILPEAIVRL TTAHPGVRVA TIESPFDLLA TELRAGDIDF
VLGALRPSEY ASDLHGERLL SEDLVVLARR DHPLLRRDIA PSDLGRARWV LPRAGAPARQ
QLDACLAELG VGAPRPIVET GDLAIIRGLL LQSDMIAAVS AHQLEYEIAA GELWPLPLQL
RGTNRAIGLI YRTGCRHSPP AEALMRQVRE VAGELGA