Gene Avin_29530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29530 
SymbolarsC 
ID7761855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3043656 
End bp3044885 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content65% 
IMG OID643805827 
ProductType III polyketide synthase 
Protein accessionYP_002800095 
Protein GI226945022 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA TGGCCCACCC CAACAGCGCG GTCCTGGCCG ATTTCATCCC GGTCCAACTG 
GCCAAGCCGG TGCCCCAGCG CATCACCCTC GAACTGACCG CCTATGGTTT CGCCAGGGCC
CACTGCCTGA GCAACGGCAT CACCGACGAG GAGGGCTTCG TCCAGGTCTA CAAGACGGTG
AAGGAGAAAT TCGACAAGTA CGCCGTGTCG CCCGCGCAGA TCAAGCAGCG GCAACTGGTC
TATTTCCCGA AGCTGACCGA CATCCGCTTC GGCGACGGCA ACTTCGACAT CGCCGACCCG
GAGCCGGACC AGGCCCACCT CAGGCTGTTC GACATCAAGA AGGACCCGCG CGGAGCCGAT
CTGAAGACCC GTCACGAGAG TTACGCCAAG GTCGTCGGCA AGGGGCTGGA GCAGATGTTC
GAAGGCACCC TCGAGGCGCC CGACGATCTG ATCCACGTGA CCTGTTCGGG TTATCTGGCG
CCGAGTCCGG CCGAGCGCAT GGTGGCCGAC CGCGGCTGGT TCGAGACCAC GGTGACCCAC
AGCTACAACA TGGGCTGCTA CGGCGCCTTT CCGGCGATCA AGATGGCCCA CGGCATGCTC
GCCTCGGCGC AGTGGGGGGC CACTCCGCCG AAGACCCGGG TGGACATCGC GCATACCGAG
CTGATGTCCG CGCACAACAA TATCGCCGAG TCGCGGGTGG ACAACATCAT TTCGGCGACC
CTGTTCTCCG ACGGGCTGAT CAAGTACTCG GTCTACCCCG AGGACGAACT GCGCCGCCAG
GGGCTGCGCG GCCTGCGCAT CCTGGCGATG AGCGAGCACC TGCTGCCGGA CTCGGCCGAC
ACCATGACCG GGGTGCCGGG CTCGCACCAG TTCGTCATGA CCCTCTCACC CCTGGTGCCG
GCGATCATCA AGCGCCATGT GCGGGCCTTC GCGGTGGACC TGCTGCGGCG CGCCGGCATG
GACTTCGAGC GCGACAAGGA CGCCCTGAGC TTCGCCATCC ACCCCGGCGG ACCGAAGATC
GTCGACCACG TCCAGGAGGA ACTCGGCCTG GCCGAGGACC AGGTGGCGAT CAGCAAGAGC
GTATTCCTGG AGAACGGCAA CATGTCCTCT TCCACGATTC CGCACATCCT CAAGGCGTAT
CTGGAAGAGG CCACCGTCGG CACCCGTATC GCATGTCTCG GCTTCGGGCC GGGGCTGACC
GCGGCCGGAC TGGTTCTGGA GAAGATATGA
 
Protein sequence
MNDMAHPNSA VLADFIPVQL AKPVPQRITL ELTAYGFARA HCLSNGITDE EGFVQVYKTV 
KEKFDKYAVS PAQIKQRQLV YFPKLTDIRF GDGNFDIADP EPDQAHLRLF DIKKDPRGAD
LKTRHESYAK VVGKGLEQMF EGTLEAPDDL IHVTCSGYLA PSPAERMVAD RGWFETTVTH
SYNMGCYGAF PAIKMAHGML ASAQWGATPP KTRVDIAHTE LMSAHNNIAE SRVDNIISAT
LFSDGLIKYS VYPEDELRRQ GLRGLRILAM SEHLLPDSAD TMTGVPGSHQ FVMTLSPLVP
AIIKRHVRAF AVDLLRRAGM DFERDKDALS FAIHPGGPKI VDHVQEELGL AEDQVAISKS
VFLENGNMSS STIPHILKAY LEEATVGTRI ACLGFGPGLT AAGLVLEKI