Gene Avin_29520 details

Gene Information

• Locus tag: Avin_29520
• Symbol: arsD
• ID: 7761854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 3041749
• End bp: 3043659
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643805826
• Product: Type I fatty acid synthase ArsD
• Protein accession: YP_002800094
• Protein GI: 226945021
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2091] Phosphopantetheinyl transferase
• TIGRFAM ID: [TIGR00556] phosphopantethiene--protein transferase domain

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGCG CAAGCCTTTC CCATCTGGTA TTCGATACCA ACAGCGAAAT GCCCCTGATC 
GCCCGCGTCT ACGAGGTGGA GTCCGCCGAG GAATTGCGTG GCGAGGAACC GGTCGGGGAA 
ACCGTGGCGG TGGTTGCCGC CGTGGAGCGC GAAGCCGGGT CGACGCGCGA CCGGGAAGCC 
GTCCGCCCGG CCACGCAGGC ACAGTGCGCC GAGTCCGGTC CCGCCGCCGA GCCGCTGGAG 
GAGGGCGCTC TGCCCTTCGT CGGCGAGGTG CTGGCCTATG TCCCCGGCGA GGCGCTGACG 
ATCCGGCGCC GCCTGCACCT GGACGAGGAC CTGTTCCTCG CCGACCACGC CTTCGTCCAT 
GCCCCCGGGG TCAAGCCGCT GTCCGCCTGC ATGCCGGTGC TGCCGCTGAC CATGAGCCTG 
GAGGTGATGG CCGAGGTGGC GGCCTGCCTG GTTCCCGGCC TGGGGCTGAT CGGCTTCGAG 
GAGGTCAAGG CGAGCCGCTG GATCGAGGTC TCCGACCGCG ACAGCGAGAT GCTGGAGGTC 
AGCGCCCGGG TGCAGGAGGT CGATGCCGAC GCCTGCCTCT GGCGGATCGC CGTGGCGATC 
CGCGGCGAGG GGCAGGAGCA GCCCTCGACC ACCGCCAGCG TGTTGTTCTC CACGGCCTAC 
CGGGTCGATC TCGACCTGGC CTTCGGCGCC TTCAGCAATC CCTATCGCCT GCCGCTGAGC 
GGCGAGGATG TCTACCGGGA ACGCCACATG TTCCACGGGC CGTGCTTCCA CTGCCTGACC 
GGCGAGATCA TCCTCGCCGA CGAAGGCGGG GTTACGGACC TGCTGACCCG GCCGCCGACC 
GGGCTGTTCC GCTCGATCGA GCGGCCCCAG TTGCTGATCG ATCCGGCCTT GCTCGACGGC 
ATCGGTCAGT TCCTCGGCGT GTGGGCCATG CAGCATGACC GCTATGTGCT GCCGATCGGT 
TTCGGCAAGC TCGAACTGTA TCGCTCGACG CCGCCGGCCG GCACCCGGGT GCCGATCCGC 
ATCGAGATCG TCCGCGACGA GGCCATGACC CTGTACGCCA ACGTGGAGAT CCAGGACGGT 
TCCGGCGGGG TCTGGCTGCG CGTCCGCGAG TGGGGCGGCA TCAAGTTCCG CCATCCGGCC 
CGGGGGCTCG ATTTCCGCCG CCAGCCGACC CGCCACCTGC TGAGCCGTCC CCTCGAACTG 
CCGTCGCTGG CCAGGGGCGT GAAGGCTTTC CAGATCGCCA AGGCCGATAC CCAGGGGTTC 
GATCCGCTGC TGCTCGCTCG TCACTACCTG CATTCGGACG AGATGCCGGC CTTCACCGCC 
AAGGCCGCCG TCCCGCCGCG CCAGCAGCAA TGGCAGCTCG GCCGGGTGGT GGTGAAGGAC 
GCGGTGCGCG CCTGGCTCGC CGAACGCAGC GAGCAGGCGG ACATGCTGCA CCCGGCGGCC 
TTCGCCATCG ACAGCGCGGC GGCCGGCCAG CCGCTGGTGG CGGCGCTGGA GGGGCATGCG 
CGGACGCCGA GGATCAGCAT CGCGCACTGC GAGGACCGGG CGGTGGCGCT GGCCGCGGAA 
TTGCCGGTGG GTATCGACAT CGAGCAGATC CGTCCGCGCG CCGCCGGTTT CCTGGAAAGC 
TTCAGCACGG CCGGCGAGCG CGAACTGCTG GACGAACTGG TGGCGGAGGG CGCGGCGCGG 
GACGAGTGGA TCACCCGCCT GTGGTCCGCC AAGGAGGCCG CCGGCAAGTT GCTGGGCAGC 
GGCCTGGATG GGGCTTTGCA GCGCTTCGAG GCGATCGCCG TCGATGGTGC CGGCAACTTC 
ATCATCCAGG TCCGCGACGG CGACCGGCTG ATCGGCGTGC ACAGCGTGCG CGACGGGAAT 
TTCGTCATCG CCTACGCGAC GACCGAAACC GCCGGCGCAT CCGGCCGCTG A 

 

Protein sequence

MSSASLSHLV FDTNSEMPLI ARVYEVESAE ELRGEEPVGE TVAVVAAVER EAGSTRDREA 
VRPATQAQCA ESGPAAEPLE EGALPFVGEV LAYVPGEALT IRRRLHLDED LFLADHAFVH 
APGVKPLSAC MPVLPLTMSL EVMAEVAACL VPGLGLIGFE EVKASRWIEV SDRDSEMLEV 
SARVQEVDAD ACLWRIAVAI RGEGQEQPST TASVLFSTAY RVDLDLAFGA FSNPYRLPLS 
GEDVYRERHM FHGPCFHCLT GEIILADEGG VTDLLTRPPT GLFRSIERPQ LLIDPALLDG 
IGQFLGVWAM QHDRYVLPIG FGKLELYRST PPAGTRVPIR IEIVRDEAMT LYANVEIQDG 
SGGVWLRVRE WGGIKFRHPA RGLDFRRQPT RHLLSRPLEL PSLARGVKAF QIAKADTQGF 
DPLLLARHYL HSDEMPAFTA KAAVPPRQQQ WQLGRVVVKD AVRAWLAERS EQADMLHPAA 
FAIDSAAAGQ PLVAALEGHA RTPRISIAHC EDRAVALAAE LPVGIDIEQI RPRAAGFLES 
FSTAGERELL DELVAEGAAR DEWITRLWSA KEAAGKLLGS GLDGALQRFE AIAVDGAGNF 
IIQVRDGDRL IGVHSVRDGN FVIAYATTET AGASGR