Gene Avin_29070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_29070 
Symbol 
ID7761810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp3000505 
End bp3000987 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content69% 
IMG OID643805783 
Producthypothetical protein 
Protein accessionYP_002800051 
Protein GI226944978 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGTG GTGATCCGGT GCGCGGCCAG CGGGGCTTCA CCTACCTGGG CGTGCTGTTC 
CTCGTCGCGC TGATGGGCGG CGCGCTGGCC GCGGCCGGCC AGCTCTGGTC GACCGCCAGC
CGGCGCGACA AGGAGCGCGA TCTGCTGTGG ATCGGCGACC AGTACGCCAA GGCGCTACGC
AGCTACTACC GCAGCGCGTC GGGCGTCGCC CAGTATCCGC AGAGCCTCGA GGAGCTGCTG
GAGGACCGCC GGCAGATCAA GCGGCAGCGC CATCTGCGCC GGCTCTACGC CGACCCCGTC
ACCGGCAGCC GCGAGTGGGG GCTGATCCGC TCGACCGACG GGCGCATCGC CGGCGTCTAC
AGCCTGTCCG AACGGCGTCC GTTGAAGAGC GCGAACTTTC CGCCGGAATG GGAGCATTTC
GAGGGAATGA CCCGCTATGC CGACTGGCAA TTCGTCGCCG ATCCGTCCTT TCGCCAGGAG
TAG
 
Protein sequence
MPSGDPVRGQ RGFTYLGVLF LVALMGGALA AAGQLWSTAS RRDKERDLLW IGDQYAKALR 
SYYRSASGVA QYPQSLEELL EDRRQIKRQR HLRRLYADPV TGSREWGLIR STDGRIAGVY
SLSERRPLKS ANFPPEWEHF EGMTRYADWQ FVADPSFRQE