Gene Avin_28540 details

Gene Information

• Locus tag: Avin_28540
• Symbol: nuoL
• ID: 7761759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 2940682
• End bp: 2942529
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643805733
• Product: NADH dehydrogenase subunit L
• Protein accession: YP_002800001
• Protein GI: 226944928
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
• TIGRFAM ID: [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.314589
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCTAC TATTCCTTAC CTGTCTGTTT CCGCTGATCG GCTGGCTGCT GCTGGCCTTC 
TCCCGCGGAC GCCTTTCCGA AAACCTGTCG GCGCTGATCG GCGTCGGCTC CGTAGGCCTC 
TCGGCCCTGA CCGCCGCCAA CGTCATCTGG CAGTTCCACA GCGCTCCGCC GGAAGGCGGC 
GTCTTCACCC AGACGCTGTG GCAGTGGATG AGCGTGGACG GCTTCGCGCC GAGCTTCACC 
CTCTACCTGG ACGGCCTTTC GGTCACCATG CTCGGCGTGG TCACCGGCGT GGGCTTCCTG 
ATCCACCTGT TCGCCAGTTG GTACATGCGC GGTGAAGAGG GCTACTCGCG CTTCTTCGCC 
TATACCAACC TGTTCATCGC CAGCATGCTG TTCCTGGTGC TGGGCGACAA CCTGCTGTTC 
CTCTACTTCG GCTGGGAAGG CGTGGGGCTG TGCTCCTACC TGCTGATCGG CTTCTACTAC 
CACGAACGCA AGAACGGCAA CGCGGCGCTC AAGGCCTTCA TCGTCACCCG CATCGGCGAC 
GTGTTCATGG CCATCGGCCT GTTCATCCTG TTCTTCAATC TCGGCACCCT GAACATCCAG 
GAGCTGGTCG GCCTGGCTGC GCAGAAATAC GCGGAAGGCG ACAACTGGCT GTGGATCGCC 
ACCCTGATGC TGCTCGGCGG CGCGGTCGGC AAGTCCGCCC AACTGCCACT GCAGACCTGG 
CTGGCCGACG CCATGGCCGG CCCGACCCCG GTTTCGGCGC TGATCCACGC GGCGACCATG 
GTGACCGCCG GCGTCTATCT GATCGCCCGG ACCCATGGCC TCTACCTGCT GACCCCGGAG 
ATCCTCGACC TGGTCGGCAT CGTCGGCGGC CTGACCCTGC TGCTGGCCGG CTTCGCCGCC 
CTGGTGCAGA CCGACATCAA GCGTGTCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC 
ATGTTCCTCG CCCTGGGCGT CGGTGCCTGG GACGCGGCGA TCTTCCACCT GATGACCCAC 
GCTTTCTTCA AGGCCCTGCT GTTCCTCGCT TCCGGCTCGG TGATCCTCGC CTGCCACCAC 
GAACAGAACA TCTTCAAGAT GGGCGGCCTG CGCAAGAAGC TGCCGCTGGC CTACGCCAGC 
TTCCTGGTCG GCGGCGCGGC GCTGGCCGCC CTGCCGCTGC TGACCGCGGG CTTCTACTCC 
AAGGACGAAA TCCTCTGGGA AGCCTACGCC AGCGGTCGCG TCCTGCTGCT CTTCGCCGGT 
CTGGCCGGTG CCTTCCTGAC CTCCCTGTAC ACCTTCCGGC TGATCTTCAT CGCCTTCCAT 
GGCGAGGCCA AGGGCGAGGT GCATGAAGGA CACGGCATCG CCCACAACCT GCCGCTCGTG 
GTGCTGATCG TCCTGTCCAC CTTCATCGGC GCCTGGATAG TGCCGCCGCT GCACGGCGTG 
CTGCCGGAAA GCGCCGGCCA TGCCGGTGGC GGGGCCAAGC ACGTGCTGGA AGTCATCTCC 
GCCGTCGTCG CGCTGGCCGG TATCGCCTTC GCCGCGCGCC TCTATCTGGG CGACCGGCAA 
CTGCTCGACG GCATCGCCCG GAGCGAGCCG GCGCGCCAGT TGATCCCCCT GTGGTATGCC 
GCCTGGGGCT TCGACTGGCT CTACGACCGC CTGTTCGTCA CTCCCTACCT GCAGCTCTGC 
CGCCTGCTCG GTCGCGACCC CATCGACCGT GGCATCAGCG TGATTCCGCG CCTGGCGCGC 
GACGGTCACG GGGTTTTGAG TCGCAGCGAG ACCGGCCAGT TGCGCTGGTA TGCCGGCTCC 
ATCGTCGGCG GTGCCGTGCT GCTGCTCGGC ATCGTGCTGT TGGCCTGA 

 

Protein sequence

MNLLFLTCLF PLIGWLLLAF SRGRLSENLS ALIGVGSVGL SALTAANVIW QFHSAPPEGG 
VFTQTLWQWM SVDGFAPSFT LYLDGLSVTM LGVVTGVGFL IHLFASWYMR GEEGYSRFFA 
YTNLFIASML FLVLGDNLLF LYFGWEGVGL CSYLLIGFYY HERKNGNAAL KAFIVTRIGD 
VFMAIGLFIL FFNLGTLNIQ ELVGLAAQKY AEGDNWLWIA TLMLLGGAVG KSAQLPLQTW 
LADAMAGPTP VSALIHAATM VTAGVYLIAR THGLYLLTPE ILDLVGIVGG LTLLLAGFAA 
LVQTDIKRVL AYSTMSQIGY MFLALGVGAW DAAIFHLMTH AFFKALLFLA SGSVILACHH 
EQNIFKMGGL RKKLPLAYAS FLVGGAALAA LPLLTAGFYS KDEILWEAYA SGRVLLLFAG 
LAGAFLTSLY TFRLIFIAFH GEAKGEVHEG HGIAHNLPLV VLIVLSTFIG AWIVPPLHGV 
LPESAGHAGG GAKHVLEVIS AVVALAGIAF AARLYLGDRQ LLDGIARSEP ARQLIPLWYA 
AWGFDWLYDR LFVTPYLQLC RLLGRDPIDR GISVIPRLAR DGHGVLSRSE TGQLRWYAGS 
IVGGAVLLLG IVLLA