Gene Avin_26820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26820 
Symbol 
ID7761589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2750810 
End bp2752138 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content57% 
IMG OID643805559 
Productmajor facilitator transporter 
Protein accessionYP_002799832 
Protein GI226944759 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAA TAATAAATGC TGCTCAACAA GTTGCGGAGT CTCCATCCGA ACAGAAAGCT 
CGACTCAGGA AGGTTGCGGC TGCGACCATA GTCGGCTCCA TGCTGGAGTG GTACGATTTT
TATCTCTACG CGACGATGGC GAGCATTGTC TTCGCGAAAA TCTTCTTCGA TCCCGGCAAT
CCTCAGAACG CCACTCTGCT GGCATTCTCG ACCTTTGCCA TCGGCTTCAT CGCCCGGCCT
TTCGGGGGCA TTCTATTCGG TCACCTGGGC GACAAGTTCG GTCGCAAACG CATGCTGGTG
GTGACTTTCT GCCTGATGGG CATTTGCACG ACGCTGATCG GGCTGATTCC CGACTATGCC
ACCTGGGGGA TCTGGGCTCC CGTATTGCTC GTCGTCATTC GCATAATCCA GGGATTGGGC
GCGGGAGCCG AACTTGCGGC AGCGGCAGTC ACGTCCTATG AGCATGCTTC GGAAGACAAG
CGCGGCAGCC AAGGGGCCTG GCCCGCACTG GGACTGAATC TGGGGCTGCT GCTTTCTTCG
TTGACCGTAT ACCTGCTAAC CCTTCCGGGT GACGAATTCC TTTTGGCGGG CGGTTGGCGG
ATTCCCTTCA TTTTCAGCAT CGTACTGGTC GGGGTTGGCC TCTGGGTACG CAACAGCATT
CCCGAGACGC CCGATTATCA GGAGGTCAGG GAACATGAGC CTCTGCCCAA ATTACCTTTG
CTGGAAATTT TCAGGAACGA TCTGAAAGGC TTGCTGGTGG TTTTCTTCGT GGCTATCGGC
TACAACGCCC TGAGTTATAT TTTCAAGGCT TTCTCGTTGG CCTATCTGAC TCAATACAAG
GGCGTGTCCG CCAATATCAC CTCGTTGTCG GTGACCATCG CCAGTTCGAT CGCGATATTC
GCGGTGCCAC TCTTCGGGCA CCTTTGTGAC AAATGGAGCA GCAAGTCGGT ATTGATCGCC
GGTGGTCTTC TGTCGGCCAT CTTCGCTTAT CCCTTCATGA GCCTGCTCGA TACAGGCGTC
AACTCCTGGA TCTATATCGC CCTGGGTGTC GGTACCGGCC TGCTGGCGCC CTTGATGTTC
GCTCCGCAGG GGTCGTTTCT CAGCCGCCAG TTCCCGACCG TCACGCGTTC TTCCGGTGTG
GGCAGCGGAC GGGAGGTCGG CACCGCACTC TCGGCAGGCC TGATACCCTT ATGGGCATTG
TCGCTGGTTT CCACTTCGCC CGGCCATTCT ACCGAAGGCG TGGTGATCAT CATGGTCGTT
GCCGCACTGA TATTGATAGT AGCGGCCTGC TGTGACCAGG GCGGCAAGCA TTCGTTGTCC
AGGAACTAG
 
Protein sequence
MSTIINAAQQ VAESPSEQKA RLRKVAAATI VGSMLEWYDF YLYATMASIV FAKIFFDPGN 
PQNATLLAFS TFAIGFIARP FGGILFGHLG DKFGRKRMLV VTFCLMGICT TLIGLIPDYA
TWGIWAPVLL VVIRIIQGLG AGAELAAAAV TSYEHASEDK RGSQGAWPAL GLNLGLLLSS
LTVYLLTLPG DEFLLAGGWR IPFIFSIVLV GVGLWVRNSI PETPDYQEVR EHEPLPKLPL
LEIFRNDLKG LLVVFFVAIG YNALSYIFKA FSLAYLTQYK GVSANITSLS VTIASSIAIF
AVPLFGHLCD KWSSKSVLIA GGLLSAIFAY PFMSLLDTGV NSWIYIALGV GTGLLAPLMF
APQGSFLSRQ FPTVTRSSGV GSGREVGTAL SAGLIPLWAL SLVSTSPGHS TEGVVIIMVV
AALILIVAAC CDQGGKHSLS RN