| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_26810 |
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| Symbol | pvdE |
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| ID | 7761588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 2748127 |
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| End bp | 2749788 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643805558 |
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| Product | pyoverdine synthetase E, pdvE |
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| Protein accession | YP_002799831 |
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| Protein GI | 226944758 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTGCCC ACCTGATCAG ACAGTCCCGC CGCCTGCTGA CCGCCGCCAC CCTGGCGAGC
GTCGCCGCCG GGGTGTGCAG CGTGCTACTG CTCACCCGGA TCAACGCCGC GCTGGTCGCG
AGCGACCCGG CGGAGCGCAC GGCCCTGGCC TGGGGGTTCG CCGTCATCGC GTTGCTGGCG
ATGGTCAGTC GCATGCTTTC CTCGGTATTG TTCGAGCGCC TTGGCCAGTA TGCGCACGCC
GAACTGCGGC GCTTTGTTTC CGCGCGGGTA ATGGCCACCG ATTTCCGCCG GCTGGAGGAG
ATCGGCGGGC CGCGGGTGCT GTCGGCCCTG TCCGAGCACT GCGCCAGGGT GGCCGACTTC
TTCGTCGGCT TTCCGGCCAT CCTGGTCAAT GCCATCGTCG TCGTCGGCTG CCTGGTCTAC
ATGGCCTGGC TGTCCTGGTC GATATTCTTC GTGGCCGCCG TGGTCATCGG CCTGGGCTCG
CTGGGCTATC ACCTGGCGCA CCTGTGGGCG ATCCGTCATC TCGATGCCGC TTCCCGCGAG
CAGGACCGCC TGTTCGGCCA TTTCCGGGCG CTGGTGGACG GGGCCAAGGA GCTGCGCCTG
CACGCCTCCA AGCGGGAGCG CTTTGCCAGG GATGTGCTGG GCGCGTCGAT CGAGGAGGTG
CGCCGCGAGC GTACGCGCGG TTCGTCGATC TTCCTCGCCT CGTCGGCATG GGGCAACTTC
CTGATCTATG CCTTCATCGG CCTGGTGCTG TTCGTGCTGG TGGGGGAGGT GCCCGAACGG
GAGCGGATCA TGACCGGTTT CGCGCTGGTC TTCGTCTTCA TGGTGTCGCC GCTGGAGAAC
CTGCTGCTCG TCCTGCCGCG GGCCAACCTG GCGAAGGTTT CGGCGCAGCG CATCGACGAG
ATCACCCGGG AGCTGCAGCC GGGCGGGGCC GAGGCGCCGA CGCGGTCGCC GGCCGCCTTC
GCGAGCCTGA GCCTGGAGGG CGTGAGCCAT CGTTACTACC ACGAGGCAGC CGACGAAGTG
TTCACCCTGG GGCCGGTCGA CCTGGATTTC TCCCCCGGGC AGATCAGTTT CCTGGTGGGC
GGCAACGGCA GCGGCAAGAC CACTCTGGCC AAGCTGCTGG TGGGCCTTTA CCGGCCGGAG
GAGGGGGCGA TCCGAATCGA CGGCGAAGCG GTGGAGGAGG CGGGCCTCGA CGGTTATCGC
CAGCTCTTTT CGGCCATCTT CTCGGACTTT CACCTGTTCG ACCGCCTGCT GGACGTGCCC
TCGGCCGACC TGGATGCCCG GGGCAACGTC CTGCTCGCCA AGCTCCATCT GCAGCACAAG
GTGCAGGTAC GCGACGGCGC CTTCACCACG CGCGCGCTCT CGCAGGGCCA GCGCAAGCGC
CTGGCGCTGG TCGTAGCCTA CCTCGAGGAC CGTCCCTTCC TGGTCTTCGA CGAGTGGGCG
GCCGACCAGG ACCCGCTGTT CAAGGAGGTG TTCTACTGCG AGCTGCTTCC CGAACTGAAG
GCCATGGGCA AGGCCGTGCT GGTGATTTCC CATGACGACC GCTACTTCCA CCTCGCCGAC
CGGGTGATCC GTATGGAGAA CGGCCAGGTG GTGGCGATTG AGAAGCCGGA TCGGCATCCC
CTGGCGGAAC CGCGGTCGCT CGAATCCAGC CTTCCGTCAT GA
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| Protein sequence | MLAHLIRQSR RLLTAATLAS VAAGVCSVLL LTRINAALVA SDPAERTALA WGFAVIALLA
MVSRMLSSVL FERLGQYAHA ELRRFVSARV MATDFRRLEE IGGPRVLSAL SEHCARVADF
FVGFPAILVN AIVVVGCLVY MAWLSWSIFF VAAVVIGLGS LGYHLAHLWA IRHLDAASRE
QDRLFGHFRA LVDGAKELRL HASKRERFAR DVLGASIEEV RRERTRGSSI FLASSAWGNF
LIYAFIGLVL FVLVGEVPER ERIMTGFALV FVFMVSPLEN LLLVLPRANL AKVSAQRIDE
ITRELQPGGA EAPTRSPAAF ASLSLEGVSH RYYHEAADEV FTLGPVDLDF SPGQISFLVG
GNGSGKTTLA KLLVGLYRPE EGAIRIDGEA VEEAGLDGYR QLFSAIFSDF HLFDRLLDVP
SADLDARGNV LLAKLHLQHK VQVRDGAFTT RALSQGQRKR LALVVAYLED RPFLVFDEWA
ADQDPLFKEV FYCELLPELK AMGKAVLVIS HDDRYFHLAD RVIRMENGQV VAIEKPDRHP
LAEPRSLESS LPS
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