Gene Avin_26190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_26190 
Symbol 
ID7761527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2675301 
End bp2676323 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID643805497 
ProductLacI regulatory protein 
Protein accessionYP_002799770 
Protein GI226944697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGATC AAGCGAAGAA GTTCTCCATC AAACAGATCG CCGCCCAGGC CGGCGTCAGC 
AAGGCCACGG TCGACCGGGT CCTGCACCAG CGCGGCGGCG TGCATCACCA GATGCGCCGG
CGCATCGAGC AGGCATTGCA GGAGCTGGAG GCCCAGGAAA CCGCGGGCCT GGCCTCGGGG
CGGACCTTCC ATATCGACGT CATCATGCAT ACGCCGCGGC GCTTCAGCCG GATCGTGGAG
GAGGCGATCA CCGCCCAGGT CGGCAGCATG GCGCCGTTCC GGATCAGGAC GCGCTTCCAC
CTGTTCGAGG ACATCGACGC CTCGCGGATG TACAAGCTCA TGCTGCGTTG CGCCGCCAAC
GGTTCGCAGG GGCTCATTCT CAAGGCGCCC GACGAGCCGC TGCTCAACGA GGCGGTGAAC
CGGGTGACGC AGGCGGGCGT CCCGGTGGTG ACGCTGGTGA CGGACCTGCC GCAAAGCCAA
CGCATCGGCT ACGTGGGGAT GGACAACCGC ACCGCCGGGC AGACCGCCGC CTACCTGCTC
GCCAACTGGC TGGACGACAG CCCCCGGGAA GTGGCGGTGG TGATCAGCAG CGACAGCTTT
CGCGGCGAGG AAGAGCGCGA AATGGGCTTT CGGCTCTGGC TGAGAAACCG CATGCCCCAT
CTCTCGGTGC GGGACATCAG CGGTGGCTAC GGCGTGTACG AACTCACCTA CGAGCGGGTG
AAAAGCGTAC TGCAGGAGCA TCCCTCGCTG AGCGCCGTCT ACAGCGTCGG CGGAGGCAAC
CGGGCGATCG TCGATGCCTT CGCCGCGCTC GAACGGCCGC TGCAGGTCTT CATCGGCCAC
GACCTGGACG AGGAGAACCG GCGATTGCTG GCCGAGGAAC GGGTCAATGC CATCATCGAT
CACGATCTGC ATGCGGACGC GCGGCATGCC TTCCTGCACA TCCTGCAGTT CCACAGGGTC
TGGCAGTCGG GACCCGTGCC GTCCTCGCCG ATCCGGATCG TCACGCCTTT CAATCTGTAT
TAG
 
Protein sequence
MLDQAKKFSI KQIAAQAGVS KATVDRVLHQ RGGVHHQMRR RIEQALQELE AQETAGLASG 
RTFHIDVIMH TPRRFSRIVE EAITAQVGSM APFRIRTRFH LFEDIDASRM YKLMLRCAAN
GSQGLILKAP DEPLLNEAVN RVTQAGVPVV TLVTDLPQSQ RIGYVGMDNR TAGQTAAYLL
ANWLDDSPRE VAVVISSDSF RGEEEREMGF RLWLRNRMPH LSVRDISGGY GVYELTYERV
KSVLQEHPSL SAVYSVGGGN RAIVDAFAAL ERPLQVFIGH DLDEENRRLL AEERVNAIID
HDLHADARHA FLHILQFHRV WQSGPVPSSP IRIVTPFNLY