| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_25350 |
|---|
| Symbol | |
|---|
| ID | 7761448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2539145 |
|---|
| End bp | 2541358 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643805419 |
|---|
| Product | acyl-homoserine lactone acylase, PvdQ-like protein |
|---|
| Protein accession | YP_002799692 |
|---|
| Protein GI | 226944619 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2366] Protein related to penicillin acylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGG AGATCCGCTG GACTGCCTTC GGTGTGCCAC ATATCCGCGC CGAGAATGAG
GCTGGACTCG GTTATGGCAT CGGCTACGCC TATGCGCGGG ACAACCTATG CCTGCTAGCC
GAGGAGATAG TCACCGCACG CGGCGAGCGA GCCCGGTTTT TCGGCGCCGA TGGCCAGTCC
TCGTCCCGGA TCGACAATGT TTCCTCGGAC TTCTTCTTCC GCTGGTTGAA CGACGACTCA
TCCGTGGCCA CCCTGTGGCA GGCACAGCCA GAGCCGGTTC GCCAACTACT CGAGGGCTAT
GCGGCGGGCT TCAACCGTTA CCTGCGGGAT ACGCCGGAAG AGCGACGGCC TGTGGCCTGC
GCCGGGCGTG AATGGTTGCG GCCGATCTCG AGCGGCGATT TGCTGCGCTT CACCCGGCGG
CTCATGATCG AGGGCGGGCT CGGGCAGTTC GTCGAAGCGG TGCTGAACGC GGCGCCACTC
GGTGAGCAGG GCAGGGCAGC CCTCGGGCGA CCCATGGATT TCGAGCAGGC GGCCCGCCGG
CGCGAGGCGT TCGCTCGGCA CACGGGCAGC AACGGCATCG CCATCGGCCG GCAACTGTCG
GATAACGGCA AGGGCTTGCT GCTGGCGAAC CCGCATTTCC CCTGGTTCGG CGCGCTGCGC
TTCTATCAAT TGCACTTGAG CATCCCCGGG CGGCTCGATG TCATGGGCGC TGCCCTGCCC
GGGCTGCCGC TGGTGAACAT CGGCTTCAAC CAGCATCTCG CCTGGACCCA TACGGTCGAC
AGTTCCAGCC ATTTCACCCT GCATCGCCTG GAACTGAACC CGCAGGCTCC TGGGCATTAT
CGCGTGGATG GCATCGACTA TCCCCTGGAG AAGCGGACGT TGAGCGTCGA GGTGCGCGAT
GCGCAAGGCA ATCTGTCGAC GCTGGAACAC AGTCTCTATC TGTCGAAGTA CGGACCGCTG
GTGAAGTGGC CAGGTCTGCT CGACTGGACC GATGGAACGG CCTATGCGTT GCACGACGCC
AACCTGGAGA ACACGCGTGC TCTCCAGCAG TGGACCGAAA TGAACCGGGC CACCAGCCTT
GCCGAGTTCC GCGCATCGAT CGAACGGACC CAGGGCATTC CCTGGGTCAA TACCCTGGCC
AGCGACGAAC AGGGCAGGGT ACTCTACATG AACGCTTCGG TCATTCCGAA CCTGGAAGCC
GATCAATTGG CGAATTGCCT CGATGCGTCG CTGGCCGGAA AAGGGTTGCC GGTGCTCGAT
GGTTCGCGCA GCACCTGCGA CTGGCGCCAC GACGAAGGCG CCGCTCAGCC CGGGATAGTG
CCTCCGGGCA AATTGCCTGT GCTCGAGCGC GAGGACTTCG TGCAGAACTC CAATGACAGT
GCCTGGATGA CCAATCCGGC TGCGCGTCTG ACGGGCTTCT CGCCGCTGGT CAGCCGCGAC
GGCCAGCTCC TGAGTCCCCG GGCCCGTTTC GCCCTCGACC AGTTGACCCG GACCGGCCGG
GAGCATCTGG ACGCACAGCG GCTAGAGCGC CTGGTGACGG ACAACCAGGT CTACCTGGCC
GATCTGTTGG TGGACGATCT GCTGACTCTG TGTCCCGAAA GCCGGGAACT GGTGGAAGTC
TGTACGGGGC TGCGTCTCTG GAGCCGCCGG GCAGGTTTGG AGGATGGCCC AGGTCTCCTG
TATTTCCAGC GCTTCGCCGA GCATTTCAGA GCGATTCCGG ATGCCTGGCG CATACCCTTC
GATCCGCAGG ACCCTGTGCA CACCCCGCGC GGCATCGCTC TGGACGATCC ACAGGTCAGG
GAAAAGGTCG TCAAGGCCTT GCTGGTTGCC CGCGACGAAG TGGCTGCGGA TGGGGTCGGT
GCGAAGACAG TCTGGGGGGA ACTCCAGAAG ACGAGTTGTG GTGCCGAGCG GATACCCATT
CCCGGCGGTG ATGGTCGGCT TGGAATCTAC AACGCGATCC AGGCGCGACC GGCCTCGGTT
GGCCGCGGCT TGGAAGTGGT AGGAGGCAGT AGCTACATAC AGTTGGTGCG TTTCACGGAA
GAGGGCCCCC AGGCTCGCGG GCTCCTGGCA TTTTCCCAGT CCACCGATCC GGCTTCGCCG
CATTACCGGG ACCAGACTCG GCTGTTTTCC CGTCAGACAT GGCAAACGAT TCCATTCAGC
GAGGCGCAGA TAGAAGCCAG CTCGCCATCC GAGGTGCTCC GATTGGTCGA GTGA
|
|---|
| Protein sequence | MVAEIRWTAF GVPHIRAENE AGLGYGIGYA YARDNLCLLA EEIVTARGER ARFFGADGQS
SSRIDNVSSD FFFRWLNDDS SVATLWQAQP EPVRQLLEGY AAGFNRYLRD TPEERRPVAC
AGREWLRPIS SGDLLRFTRR LMIEGGLGQF VEAVLNAAPL GEQGRAALGR PMDFEQAARR
REAFARHTGS NGIAIGRQLS DNGKGLLLAN PHFPWFGALR FYQLHLSIPG RLDVMGAALP
GLPLVNIGFN QHLAWTHTVD SSSHFTLHRL ELNPQAPGHY RVDGIDYPLE KRTLSVEVRD
AQGNLSTLEH SLYLSKYGPL VKWPGLLDWT DGTAYALHDA NLENTRALQQ WTEMNRATSL
AEFRASIERT QGIPWVNTLA SDEQGRVLYM NASVIPNLEA DQLANCLDAS LAGKGLPVLD
GSRSTCDWRH DEGAAQPGIV PPGKLPVLER EDFVQNSNDS AWMTNPAARL TGFSPLVSRD
GQLLSPRARF ALDQLTRTGR EHLDAQRLER LVTDNQVYLA DLLVDDLLTL CPESRELVEV
CTGLRLWSRR AGLEDGPGLL YFQRFAEHFR AIPDAWRIPF DPQDPVHTPR GIALDDPQVR
EKVVKALLVA RDEVAADGVG AKTVWGELQK TSCGAERIPI PGGDGRLGIY NAIQARPASV
GRGLEVVGGS SYIQLVRFTE EGPQARGLLA FSQSTDPASP HYRDQTRLFS RQTWQTIPFS
EAQIEASSPS EVLRLVE
|
|---|
| |