Gene Avin_24700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_24700 
Symbol 
ID7761384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2467350 
End bp2468528 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content51% 
IMG OID643805352 
Productmajor facilitator transporter 
Protein accessionYP_002799629 
Protein GI226944556 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATTCGA GAGTGCCAGA GGGCAGACGT TTGATGATCG GGTTTGTATT GTTTTGGACC 
CAGTTCCTAG TGGTCAGTAA TATATTGATC ATGCCGGTGT TGCTTCAGGG CGTACGGGAA
GAGTTTGTTT TGGATGTCGA CTCAATAGGC CTGTTGTTGG CTGCGTTTCC GTTGATGGCG
TTCATTAGTA ACATGTTCGT AGGCCGGTTT ATCGATCGAG TCGGCCGACC CTTGAGTTTA
CTGATGGGGC TCTGTACGGT CGCAGCGTGT TATCTGCTTA TGTTTTTTGC AGAGAACGAC
ACCGTTGCTA TTGTGTCACG AGGGCTGACC GGCATCTGTA TGCCACTTGT AGGTGCGAGC
CTCTATGCGG TGATTGCCGA CGTCTATGCC GACAAGGTTC GTATGCGAGT CATTGCGCTC
GTCAGCACTG CCGCATCATT GGCGGGATTG ATTACTCTTC CGGTAGGGGC ATGGTTCTCT
ACTTCGTCTA GATGGCATTA CGTGTTTCTG ACGTTTGCCA TTGCTTGCTT TTGCTTGGGA
GTGATCAGCT ATTTTTCTTA CTATCGCCGG TATGCACCCA ATCGATTGAG GGGCGCGGAT
GTAAGGCAAG GTGCTATAAG GCTTTACCGA GAGGATGCGG TGCTACGAAG TTATGCCCTG
TTATATTGGC TCCAGGGCTT TGCCTATTTT TCGTTGATTT TTTGGATGCC ATCATACTTT
CAGCGATTAT TGGATGGAGG GCAATCTTCC ACCGTGCTGC TTTTCGGCGG AATAGGGGCA
GTGTTGGGGG CGTGGTGTTT GGCGAGGCTG ACGGGCAGGC GAGTGGGGGC CTTCTACGCT
TTGCTTGGGA TCAATGGTAT CGCTGTCTTG AGCCTGCCTG CTTCTGCTCT GGGCTTATGG
GCAGCCTCTG GAGTATGGTT TGTTTACAAT GCCTGTCGTC AGTTGTTATC TGCGCATATC
CTCTCGGGGG CTAATGCTCG TTGTGGCAAT GCTGATCGTG GGGTATTGAA TGCTACGATG
AGTGTCGGGT ACCAGGCTGT GGGGGCTGCT GCTGCGTTTT TGACGGCACA GTTGTCTTTT
CTGCCTCATT CGCTTTCGAT AATCTGCATT ATTGTCACAT TGGCGTTGTT GCCGAGCTTT
TACTTTTATA AAAACCTCGA TCGTTTGAAT GCGTTGTGA
 
Protein sequence
MHSRVPEGRR LMIGFVLFWT QFLVVSNILI MPVLLQGVRE EFVLDVDSIG LLLAAFPLMA 
FISNMFVGRF IDRVGRPLSL LMGLCTVAAC YLLMFFAEND TVAIVSRGLT GICMPLVGAS
LYAVIADVYA DKVRMRVIAL VSTAASLAGL ITLPVGAWFS TSSRWHYVFL TFAIACFCLG
VISYFSYYRR YAPNRLRGAD VRQGAIRLYR EDAVLRSYAL LYWLQGFAYF SLIFWMPSYF
QRLLDGGQSS TVLLFGGIGA VLGAWCLARL TGRRVGAFYA LLGINGIAVL SLPASALGLW
AASGVWFVYN ACRQLLSAHI LSGANARCGN ADRGVLNATM SVGYQAVGAA AAFLTAQLSF
LPHSLSIICI IVTLALLPSF YFYKNLDRLN AL