| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_24410 |
|---|
| Symbol | |
|---|
| ID | 7761356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2436314 |
|---|
| End bp | 2438002 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643805326 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_002799603 |
|---|
| Protein GI | 226944530 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.870441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATG AACGACATTC GGCCGGCGAA ACGCTGTTCC AGGTGAAGAA CCTGAACGTG
GGCTTCCGGA CGCCGCATGG CTACAAACGG GTCGTCCGCG ATTTCGAGCT GACGCTGCGT
CGCGGCGAAA CCCTGGCCAT CGTCGGCGAG TCCGGCTCGG GCAAGACGGT GGCGACCCGC
GCCCTGATCG GGCTGGCCGG AGATAACGCG GTCGTCGCGG CGGACGTCTT GCGCTACAAG
GACACCGATC TGCGCCAGGC CGGCCGGCAG ACCCTGAAAA AACTGCGCGG CGCGCAGGTG
GGCTACGTGC TGCAAGACGC CCTGGTGTCG CTCGATCCCC TGCAGCCCAT CCGCAACGAG
ATCGCCGAAC CGCTCGACGC GCATGCCCGG CTGTCGAAAG CGGAAATCCG CGAGCGGACC
ATCCAACTGC TGACCGAAGT GGGGGTGCCG CAGCCCGAGA TCCGCAAGGA CCAGTATCCG
GGCGAGCTGT CCGGCGGTTT GCGCCAGCGC GCCCTGATCG CGACGGCGCT GGCGCTGCAT
CCGCCGGTCA TCATCGCCGA CGAGCCCACC ACGGCGCTCG ACGTGGTGGT GCAGGCCCAG
GTGCTGGGCG TGCTGGCGCA ACTGATCGCG CGCGGCACCA GCCTGATCCT GATCAGCCAC
GACCTGGCGG TGGTGGCCAG GCTGGCCGAC CGCATCCTGG TCATGAAGTC CGGGATAATC
GTCGAAAGCG GCACGCGGGA CGAGGTGCTC GGCAACCCGC AGCATGCCTA CACCAAGGCG
CTGATCCAGG CGGTGCCCAG CGGCGATACG CGGGGCCGCC GGCTGAGCCC CGCCGCTCCG
GCGCGGATCG GGCGCCCCCG GCGGCACGGC GAGGCGGCCG AAAACGACAG CGCCACGCCG
ATCCTGGAGG CGAAGCACCT GAGCAAGTCC TTCCATGGGC CGGACGGGCG CCTGCGCGAG
GCGGTCGCCG ACGTCTCCTT CGAACTGTTC AAGGGCGAGG TGCTGGGAAT CGTCGGCGCG
TCGGGCTCCG GCAAGAGCAC GCTGGCCAGG CTGCTGCTGG CCTTGACCGA CTACGACGCG
GGTGCGGTGC TCTACCGTGG CCTGGAGTGG CCCAGAGCGG ACGACAGAAC CAAGCGCCGG
GTGCGCGGGA AGATTTCCGT CGTCTATCAG GACCCCTACA GCTCCTTCGA TCCGCGCTGG
AACGTCGGGC GGATACTGGA GGACGCCCTG CGCCTGCATG CCGAAGACGG CCATGCGCCG
CAACGAGCCG ACCTGCTGGA GTTGCTGGAA GCCGTGGGCC TGAACGAAAG CCACCTGCGT
GCCCGCCCCC GCCATCTTTC CGGCGGCCAG CGCCAGCGGG TGGCGATCGC CCGGGCCCTG
GCCGTGCACC CGGAAATCCT CATCCTGGAC GAAGCGGTAT CCGCGCTGGA CGTCAGCATA
CAGGCGCAGA TCCTCGACCT GCTGGAAGAC CTGAAGGCGC GGTATTCCCT GAGCATCCTG
TTCATCTCCC ACGACCTGGG CGTCATCCAC CACATCGCCG ACCGCGTGCT GGTGATGAAA
GACGGCGCCG TGGTGGAAGA AGGAGATGCG GACGCCGTGT TCCATGCCCC CCGGCATCGC
TACACGCAGG AACTGGTGGC CGCCCTGCCG CATTTCGACA ACTCGCGCGG CGCGGGACGG
CATCCCTGA
|
|---|
| Protein sequence | MTHERHSAGE TLFQVKNLNV GFRTPHGYKR VVRDFELTLR RGETLAIVGE SGSGKTVATR
ALIGLAGDNA VVAADVLRYK DTDLRQAGRQ TLKKLRGAQV GYVLQDALVS LDPLQPIRNE
IAEPLDAHAR LSKAEIRERT IQLLTEVGVP QPEIRKDQYP GELSGGLRQR ALIATALALH
PPVIIADEPT TALDVVVQAQ VLGVLAQLIA RGTSLILISH DLAVVARLAD RILVMKSGII
VESGTRDEVL GNPQHAYTKA LIQAVPSGDT RGRRLSPAAP ARIGRPRRHG EAAENDSATP
ILEAKHLSKS FHGPDGRLRE AVADVSFELF KGEVLGIVGA SGSGKSTLAR LLLALTDYDA
GAVLYRGLEW PRADDRTKRR VRGKISVVYQ DPYSSFDPRW NVGRILEDAL RLHAEDGHAP
QRADLLELLE AVGLNESHLR ARPRHLSGGQ RQRVAIARAL AVHPEILILD EAVSALDVSI
QAQILDLLED LKARYSLSIL FISHDLGVIH HIADRVLVMK DGAVVEEGDA DAVFHAPRHR
YTQELVAALP HFDNSRGAGR HP
|
|---|
| |