Gene Avin_23030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23030 
Symbol 
ID7761219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2299886 
End bp2300416 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID643805185 
Product2-5 RNA ligase protein 
Protein accessionYP_002799466 
Protein GI226944393 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA AGAACCTGCG CCTGTTCTTC GGCCTGCCCC TGCCGCATCG ACAGGCCGAG 
GCGATCGACC GCTGGCGCCG GGAACTGGGG CTCGACGGCC GCCCCGTCGC CAGGCGCAAC
CTGCACCTGA CCCTGGCCTT TCTCGACAGC CATCCGCTCG AGCGCCTGGC GGAACTGCAA
TGCTTGGGCG AAGGCATTCG GGGAAATGCT TTCGAAATGA AGCTGGATCG CCTGGAAACC
GGCCGTCACG GCCTCGTCTG CCTGGGCACC GGCCAGGCAC CGGAGGCCCT GCTGCAGCTC
GCCGGGGAAC TGCAGCGGCT ACTGCGTGGC GCCGGCTACG CCCTCGACGA GCGTGCATTC
TGGCCGCATC TCACACTGGC CCGGGACTGC CGCAATCCCC CGCTCCCCGC CAGCCCCCCG
GATTTCCGCT GGAGGGCCGA ACGCTTCGTC CTCTTCCATT CGACGAGCGA CGCCCAGGGA
ACCCTCTACC GGCCCCTGTT CCATTGGCCG CTGGTCATGC CGGAGCGCTG A
 
Protein sequence
MNVKNLRLFF GLPLPHRQAE AIDRWRRELG LDGRPVARRN LHLTLAFLDS HPLERLAELQ 
CLGEGIRGNA FEMKLDRLET GRHGLVCLGT GQAPEALLQL AGELQRLLRG AGYALDERAF
WPHLTLARDC RNPPLPASPP DFRWRAERFV LFHSTSDAQG TLYRPLFHWP LVMPER