Gene Avin_21930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_21930 
SymbolasfA 
ID7761111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2189212 
End bp2190849 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content73% 
IMG OID643805078 
Productoxidoreductase flavoprotein, asfA 
Protein accessionYP_002799359 
Protein GI226944286 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGCCG CCTCGAGTTT CTACAGTGCC ACGGGGGCCA GCCAGAGCCT GGAGTTGCAG 
GCCGATGTGC TCGTGCTGGG CGGCGGTCTG TCCGGAACCT GGGCCGCCGT CGCGGCGGCC
CGCGCCGGCG CGCGGGTGAT CCTCGCCGAC AAGGGTTGGT GCGGCGCCAG CGGCGTCACC
GCGACGGCCG GCCCCGGACA CTGGTGGGTG GCGCCCGAGG AACGCCGGGC CGCCATCGAC
AAACGCCTGG CCGGCGCCCT GGGGCTAGCC GATCCGCAGT GGATGGCGCG GATTCTCGAC
TGCACCTGGC GCACCTTGCC GACCCTGGCC GGCTACTACG ACTTTCCCCG CGACGAACGG
GGCGTGACCC AGTATCGCGG CCTGCGCGGC CCGGAATACA TGCGCGGCAT GCGCCGGCTG
GCCGAGGACA ACGGCGTGTC CATCCTCGAC CAGAGCCCGG CCCTGGAACT GCTGCGCAAC
GCCGACGGAA GACTGGCCGG CGCGCGCGGC TGGCAGCGCC AGGCCAGGCG CGACTGGCAG
GTGCGCGCCC CGGCCGTGGT GGTGGCGACC GGCGGCTGCG GGTTCCTCTC GCGCCTGCTC
GGCAGCCAGA CCAACACCGG CGACGGCCAT CTCATGGCCG TGGAGGCCGG CGCCGAGCTG
TCCGGCATGG AGTTCTCCAG CTACTACTGC ATCGCTCCGC TGGACAGCAC CATGACCCGC
TCCATGGTCT ACACCTTCGG CAGCTATTTC GACGACGCCG GGCGGCCGCT GGGCATAGTG
CCCGGCCCGG ACTTCACCAA CGCCCTGGCC CGCGCGCTGC TCCAGGGCCC CGTGTACTGC
CGGCTGGAAC GCGTCCCGGA AGCGCTGCGC GCGCGCCTGC CCTACGTCCA GCCGAACCTG
ATGCTGCCGT TCGCCAGGCG CGGCATCGAC CCCTACCGCG ACCGCTTCCC GGTGACGCTG
CATGCCGAGG GCACCATTCG CGGCGTGGGC GGCCTGCGGG TCGTGGACGC GCATTGCCAG
ACCGGGGTGC CGGGCCTGTT CGCCGCCGGC GATGCGGCCA GCCGGGAGCC GGTCACCGGC
GCGGTTTCCG GCGGTGGCGC GGTGAACGCG GCCTGGGCGC TGTCCTCCGG GCAATGGGCC
GGCCAGGGCG CGGCCCGCCA TGCGCGCGGC AACGCATCCC TCGCACGCCG GGGCCTGCTG
CTCGGCCTGG GCGGGATCGG CATGCCGCGC CGGCAGGGCG ACAAGGCTCC CGACAACCGG
ACCCTGGTGC GACGCATCCA GGAGGAAATG CACCCCTACG ACAAGAACCT GTTCCGCTCC
GGCGGCCAAC TGGATCGTTC GCTGGCGGAA CTGGAAAACG TCTGGGACCG CTTGCGCCAC
GCTCCCGAGG GTCACGGCGG CGATCCCCTG CGCGTGCGGG AAACCGCCGC GCTGGCGGCA
GTGGCCCGCT GGTGCTACGG CGCCGCCCTG GAACGCCAGG AGAGTCGCGG CCTGCACCAG
CGCAGCGATG CGCCGGCGCA ACGCGTGGAG TTCGACCTGC ACCTGCGCAG CGGCGGCCTG
GACCGGCCCT GGGTGCGTCG CGACGGACTG CCGGCAAGCA CCTGGACGGA CTTCGAGAAC
AGGAGCCACA ACGCATGA
 
Protein sequence
MCAASSFYSA TGASQSLELQ ADVLVLGGGL SGTWAAVAAA RAGARVILAD KGWCGASGVT 
ATAGPGHWWV APEERRAAID KRLAGALGLA DPQWMARILD CTWRTLPTLA GYYDFPRDER
GVTQYRGLRG PEYMRGMRRL AEDNGVSILD QSPALELLRN ADGRLAGARG WQRQARRDWQ
VRAPAVVVAT GGCGFLSRLL GSQTNTGDGH LMAVEAGAEL SGMEFSSYYC IAPLDSTMTR
SMVYTFGSYF DDAGRPLGIV PGPDFTNALA RALLQGPVYC RLERVPEALR ARLPYVQPNL
MLPFARRGID PYRDRFPVTL HAEGTIRGVG GLRVVDAHCQ TGVPGLFAAG DAASREPVTG
AVSGGGAVNA AWALSSGQWA GQGAARHARG NASLARRGLL LGLGGIGMPR RQGDKAPDNR
TLVRRIQEEM HPYDKNLFRS GGQLDRSLAE LENVWDRLRH APEGHGGDPL RVRETAALAA
VARWCYGAAL ERQESRGLHQ RSDAPAQRVE FDLHLRSGGL DRPWVRRDGL PASTWTDFEN
RSHNA