| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_21710 |
|---|
| Symbol | |
|---|
| ID | 7761091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 2169806 |
|---|
| End bp | 2170633 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643805059 |
|---|
| Product | TonB-like protein, ferric siderophore transporter |
|---|
| Protein accession | YP_002799340 |
|---|
| Protein GI | 226944267 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAACG CCCTTGGCGC CGGCAGAGCG CCTCATATGC CGAAGCATGA AGAACGCCAG
ACGGAAAAGG CGCCGGCATT CGACGCAGCG CGACCTCAGG CGTTGGAGGC ATCGCGTTTC
AGAGTCGCCA ACCGATCCCC AAGGAGAGAA GTTCTGGCTC TGGGCATGCT GGCGGCCCTG
CTGCTGCACG CCGGCGCCCT GCACTGGCTC GGCCGGCACA GCGCACCGCC CCTGCCGGAA
GTCCCCGTGC AAATCCCCCC CATGACCATC GAGTTCAGCA GCCCGGCGCC ACCCGCCGAG
CCGGTCGAAC CGACTCCGCC GCCACCGACG GTCGCCGCAC CGGAGCCGCC TCCCCCTCCG
CCGGTGGTCG AGGAACTGGC CCCCAGAAAG GCGCCGCCCA AGCCGCCCAA ACCCCAGCCG
CCCAGGCAGA AGGCCGAAGC CAAGCCGGCC AGGACGCCTC CGGCCAAAGC CGAGGCGCCA
CCCGCTCCGG CGGCTCCCCC GGCGCCGGCC GCCCCGGCAT CGGCGCCCGC GCCCGCCCAG
GCCCCGCTCA CGCCACCCTC GGCCGGCGCC GGCTATCTGA AGAACCCGGC ACCCGAATAC
CCGGCCCTGG CCCTGCGCCG CAACTGGGAA GGCAGCGTCC TGCTGCGCGT GCATGTGCTG
GCCAGCGGCA GGCCGAGCGA GATCCGCGTC CAGCAGTCCA GCGGACGCGA CCTGCTCGAC
GAAGCCGCGG TCGCCGCGGT CCGCCGCTGG AGCTTCGTCC CCGCCAAGCG CGGCGACCAG
GCCCAGGACG GCTGGGTGAC CGTGCCCATC GATTTCAAAC TGAACTAA
|
|---|
| Protein sequence | MGNALGAGRA PHMPKHEERQ TEKAPAFDAA RPQALEASRF RVANRSPRRE VLALGMLAAL
LLHAGALHWL GRHSAPPLPE VPVQIPPMTI EFSSPAPPAE PVEPTPPPPT VAAPEPPPPP
PVVEELAPRK APPKPPKPQP PRQKAEAKPA RTPPAKAEAP PAPAAPPAPA APASAPAPAQ
APLTPPSAGA GYLKNPAPEY PALALRRNWE GSVLLRVHVL ASGRPSEIRV QQSSGRDLLD
EAAVAAVRRW SFVPAKRGDQ AQDGWVTVPI DFKLN
|
|---|
| |