| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_21500 |
|---|
| Symbol | |
|---|
| ID | 7761073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2149537 |
|---|
| End bp | 2151129 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643805041 |
|---|
| Product | Rhodanese-like protein |
|---|
| Protein accession | YP_002799322 |
|---|
| Protein GI | 226944249 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.960908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CCATAACGCC GCAGCAATTG CAGCAATGGC TGCACGACGG GCGGGAAATC
GCCCTGTTCG ATGTACGCGA ACACGGACAG TACGGTGCGG CGCACCTCTT CTATGGCGTG
TCGCTGCCCT ACAGCCGGCT GGAGCTGGAT GCCGTTCGGC TGGCGCCGAA TCCGGCGGTA
CGCCTGGCGA TCTACGACGA AACCGGCGGC GAACTGGCCG AGCGCGCCGC CGTACGCCTG
CGGGCGCTGG GCTACCGCCG GGTGCACATC CTCGACGGCG GCGCGCAGGG CTGGCGGGCC
GCCGGCTTCG AGCTGTTCGC CGGGGTCAAC GTGCCGTCCA AGGCGTTCGG CGAACGGGTC
GAACTGGCTT GCGCCACGCC GCACATCTCG GCGCCCGAAC TGGCCGCCCG GCAGGCGCGC
GGCGAGCCGC TGCTGGTGCT GGACGGCCGG CCGTTCGAGG AATACCGCAA GATGAACATT
CCCGGCGCCA TCTGCTGCCC GAACGGCGAG CTGGGCTACC GGCTGGGCGA TCTGGTCGCC
GACGAGCGGA CCACCATCGT GATCAACTGC GCCGGGCGCA CGCGCAGCAT CATCGGCGCG
CAGACGCTGA TCAACCTAGG CGTGAAGAAT CCCGTCTACG CGCTGGAGAA CGGCACCCAG
GGCTGGTTCC TCGCCGATTT GCCGCTGGAG CACGGCAGCA CGCGGCGCTA CCCGGAGTCG
ACCGAGCCGG CCGGCCTCGC CGAACGGCGC GAGGCCGCGC AGCGGCTGGC GGCGCGCGCC
GGGGTGGAGG CGTTGGCGGC GCAGCAGGTG GCGGCCTGGG CCGACGACCC CGAGCGCAGC
CTGTTCCTCC TCGATGTGCG CAGCGCCGAG GAATTCGCCG CCGGCAGCCT GGCGGGCGCC
CGCCACGCGC CGGGCGGGCA GTTGATCCAG GCGACCGACC AGTACGTCGG CGTGCGCGGG
GCGCGGATCG TGCTGTTCGA CGCCGAGGGC ATCCGCGCGC CCATCGTGGC CAGTTGGCTG
CGCCAGGCGG GCCATGACGC CCATGTGCTG GCCGGCGGCC TGGACAGCGG TCTGGCGCTG
GCCGGCCGCG TCCCGGCGTT CGAGCTGCCC GCGCTGGCGG AAGCGGATGC CGCGACCCTC
GCGGACGAAC TGGCCGGGGA TGCCGTGCGG CTGTTCGACC TGCGCCCGAG CATGGCCTAC
CGCGCCGTGC ATATAAAAGG CGCGGACTGG TCGATCCGCC CGCTGCTGGC CGCCGCCGCG
GCCGGCGAAA CGCGCCCGCT GCGCCTGCTC GCCGACGACC CGTGGCTCGC GCGACTGGCC
GCCCTGGAGT TGCCCGAGGC GCAACGCGAG ACTGTGCGGA TCTGCCGCGC CGATCCGGCT
GTCTGGCGCG CCGCCGGGCT GGCGCTGGAG GAGGGCGGCG GGCAGCCGCC GGATGCCGAA
TGCATCGATT TCCTGTTCTT CGTCCACGAC CGCCACGCCG GCAACAAGGC GGCGGCGCGC
CAGTACCTGG CCTGGGAACT GGGTCTGCTG GCGCAGCTCG ACGCGCGCGA ACTGGCCGCC
TTCCGCCCGC TGGTCGCGGA GGATCGCTCA TGA
|
|---|
| Protein sequence | MSQTITPQQL QQWLHDGREI ALFDVREHGQ YGAAHLFYGV SLPYSRLELD AVRLAPNPAV
RLAIYDETGG ELAERAAVRL RALGYRRVHI LDGGAQGWRA AGFELFAGVN VPSKAFGERV
ELACATPHIS APELAARQAR GEPLLVLDGR PFEEYRKMNI PGAICCPNGE LGYRLGDLVA
DERTTIVINC AGRTRSIIGA QTLINLGVKN PVYALENGTQ GWFLADLPLE HGSTRRYPES
TEPAGLAERR EAAQRLAARA GVEALAAQQV AAWADDPERS LFLLDVRSAE EFAAGSLAGA
RHAPGGQLIQ ATDQYVGVRG ARIVLFDAEG IRAPIVASWL RQAGHDAHVL AGGLDSGLAL
AGRVPAFELP ALAEADAATL ADELAGDAVR LFDLRPSMAY RAVHIKGADW SIRPLLAAAA
AGETRPLRLL ADDPWLARLA ALELPEAQRE TVRICRADPA VWRAAGLALE EGGGQPPDAE
CIDFLFFVHD RHAGNKAAAR QYLAWELGLL AQLDARELAA FRPLVAEDRS
|
|---|
| |