Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_21290 |
Symbol | |
ID | 7761054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 2128436 |
End bp | 2129809 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643805024 |
Product | OprE-like outer membrane porin |
Protein accession | YP_002799305 |
Protein GI | 226944232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC CAGCGCTTGA TAGCAGCGTT TCGATCTTCA CCGAGCCGGC GCGCGGCGCG GAGCGAACCA TCCTGGCCGC CATGCTGGCC ATCCTGGGCC AGACGCTGGC GCAACCCGCT ACCGCCGCCG GGTTCATCGA AGACAGCAAG GCCACGCTTT CGCTGCGCAA CTTCTACTTC AACCAGGATA ACCGCAACGG TGGCGGCCCC AGGTCCGATG AGTGGGGCCA GGCTTTCTTC CTCGACTACA AGTCCGGCTT CACCGAGGGC CCGGTCGGCT TCGGCCTTGA CGTGTTCGCC ATGCACGGCA TTCGCCTGGA CGGCGGCGGC CGCGCCGGCA AGGCGGACGC CGAGCGCACG CCCGGCGCGC TGTTCCCGCT GGAAAGCAAC GGCAAGGCGA AGACCGACTT CGGCCGCGTC GGGGTGACCG GCAAGCTGCG TTACTCCAGG ACCGAGGCGC GCCTAGGCAC CCTGCTGCCG AAGATGCCGG TGCTGATCTA CAACGACGGC CGCCTGCTGC CGCAACTGTT CCATGGCGCG CAGATCACTT CCAACGAGAT CGACAACCTG AGCCTGACCG CGGGCAAGAT CGAGCATTCC ACCGAACGTA ACTCCGCCGA CAGCCACGGC CTGTCCATCG CCGGCGCCAA CAGCGGCAGC AACGCCCGCT TCAGCAACGA GTTCTACTTC GCCGGCGCCG ATTACAAGCC CACCAGGGAC CTGCTGCTGC AGTACTACTA CGGCAACCTG CGCGACTTCT ACAAACAGCA CTTCTTCGGC CTGATCCATA ACTGGAAGCT GCCGGTGGGC GCGCTGAAAA GCGACCTGCG CTACTTCTAC AGCGACTCCG ACGGCAAGAA CGAGAGCGCC TCCGGACGCG CCGAGGGCTA CCGCAGCGCC GGCGCCAACG GCAGCAGCGG CGAGGTCGAC AACAACCTGT GGAGTGCGAT GTTCACCTAC AGCCTGTCCG GCCACTCGCT GGGCCTCGGC TACCAGAAGG TCACCGGCAA CAGCGACTGG CCGCGCATCA ACCTGGGCAC CGGCCAGACG GTCCACCTGA TCACCAACCT GCAGAACGGC AAGTTCGCCA GCGCCGGCGA GAAATCCCTG GTCGGCCAGT ACGCCTACGA CTTCGCCAAG CTCGGCGTGC CCGGCCTGAA GGCCAGCCTG ACCTACGTCA AGGGCTGGGA TATCGACGCC GCCGGCAGCG ACAAGCGCGA ATGGGAGCGC GATTTCCGCG TGGACTACAC GGTGCAGTCG GGCTTCCTCA AGGGCGTCGG CCTCACCTGG CGCAACGCCG CGCTACGCGG CAACGACACC ACCGACCGCG ACGAGAACCG GCTGATCGTC AGTTACAGCA TTCCCCTGCT CTGA
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Protein sequence | MSHPALDSSV SIFTEPARGA ERTILAAMLA ILGQTLAQPA TAAGFIEDSK ATLSLRNFYF NQDNRNGGGP RSDEWGQAFF LDYKSGFTEG PVGFGLDVFA MHGIRLDGGG RAGKADAERT PGALFPLESN GKAKTDFGRV GVTGKLRYSR TEARLGTLLP KMPVLIYNDG RLLPQLFHGA QITSNEIDNL SLTAGKIEHS TERNSADSHG LSIAGANSGS NARFSNEFYF AGADYKPTRD LLLQYYYGNL RDFYKQHFFG LIHNWKLPVG ALKSDLRYFY SDSDGKNESA SGRAEGYRSA GANGSSGEVD NNLWSAMFTY SLSGHSLGLG YQKVTGNSDW PRINLGTGQT VHLITNLQNG KFASAGEKSL VGQYAYDFAK LGVPGLKASL TYVKGWDIDA AGSDKREWER DFRVDYTVQS GFLKGVGLTW RNAALRGNDT TDRDENRLIV SYSIPLL
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