| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20670 |
|---|
| Symbol | |
|---|
| ID | 7760993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 2058056 |
|---|
| End bp | 2058763 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643804964 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002799245 |
|---|
| Protein GI | 226944172 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03473] hopanoid biosynthesis associated protein HpnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGG CGTCCGCCGC GGGCGATGCT GTCGAGCGTG CCCGGCGTAT GCCGGGGCTC
GCCGTCGGTT TGCATCTGGT TCTGGCCGAC GGCAAGGCCG TGCTGCCGCC TTCGCTTATC
CCCGACCTGG TGGACGCCCA AGGCTGGTTC AACAGCGCCA TGGTGCGCAA CGGCTTCCGT
TTCTTTTTCC TGCCCAGCGT GCGGCGCCAG TTGGCCGCCG AGATTCGTGC CCAATTCGAA
GTTTTCGCTG CGACCGGCTT GACCTTGGAT CACGTCAATG CGCACAAGCA TTTCCATCTG
CACCCGACCA TCTTGTCGTT GCTGCTCTCC ATCGGCCGAG ATTTCGGCCT ACGCGCCGTG
CGGCTGCCTG CCGAACCGGG AATGGGGCCG TGGCTCCGCC CTTGGTTGAG CCTGATGCGC
CGGCGCCTGG ATCGGGCCGG GATTACTTAT AACGACCATG TTTTCGGCCT CCATCACAGT
GGCGGCATGG ACGAGGGGGT ACTGCTGAAG ATGCTGAGTC AATTGCCGGA CGGTCTTTCG
GAGCTGTACC TGCACCCAGC CGTTCGTGAC GGATTGACGG CCAGCATGGC CGACTACCGC
CATTCCGACG AGTTGGCTGC TCTGCTGTCG CCACGCGTGC GTGGTGCCAT TGTCGGGCGC
TACCGGCTGT GCAGTGGCTT CCGTGATCCG GCGGCTGCAG CAACATGA
|
|---|
| Protein sequence | MVAASAAGDA VERARRMPGL AVGLHLVLAD GKAVLPPSLI PDLVDAQGWF NSAMVRNGFR
FFFLPSVRRQ LAAEIRAQFE VFAATGLTLD HVNAHKHFHL HPTILSLLLS IGRDFGLRAV
RLPAEPGMGP WLRPWLSLMR RRLDRAGITY NDHVFGLHHS GGMDEGVLLK MLSQLPDGLS
ELYLHPAVRD GLTASMADYR HSDELAALLS PRVRGAIVGR YRLCSGFRDP AAAAT
|
|---|
| |