| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_20210 |
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| Symbol | |
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| ID | 7760949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 2011070 |
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| End bp | 2011942 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643804918 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002799201 |
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| Protein GI | 226944128 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCTGGA AAATCCGTGG GCGCAGGATC GGGCCACAAC AAATCCAAGA ACTGGAGGCC
CGTATGATTC GTGGTTCCAC TGCACTGGTC GGCATCGTCG GTTCGCCGAT CGCCCAGGTC
AAATCCCCGG AAAACTTCAA TGCCTGGTTC GCCGAACACG GCCAGGATCT GGCGATGCTG
CCCATCGACC TGCAGGAGTC GTCCCTGGAC GCCTTCCTCG CCACCCTGCG CGGCTGGAAG
AACCTGCGCG GTTGCGTGGT CACCGTGCCT TACAAGCAGC TCCTGGCCAC TCGCCTGGAC
GCCGTCAGCG AGCGCTCGAC GGCCCTGCGT TCGGTCAACG TGATCCGCCG CGAGGCGGAC
GGCCGCCTGG TCGGCGACAT CGTCGACGGC GAGGGCTTCC TCAACGCGGC GCGCCGGCAC
GCTTTCGAGC CCGGCGGCAA GCGCGCCCTG GTGGTCGGCT CCGGCGGCGT CGGCAGTGCC
ATCGCTTATT CCCTGTGCGA GGGCGGGGTG AGCCGGCTGG CCATCGCCGA CCTCAGCGCC
GAGCGCGTCG AGAGCCTCTG CGCGCTGCTG CGCCGGGCCT TCCCGGCCAT CGAGATCGGC
GGCGGCCATG CCTCGCTCGC CGATTTCGAC CTGGTGGTCA ACGCCTCGCC GGTGGGCATG
GGCGACAGCG GCGAGCTGCC GCTGCCCGAG AGCCTGCTGG AAAGCCTGGC GAAGCACTGC
CTGGTCGCCG ACGTGGTGAC CTCGCCGGAG ATCACACCGC TGCTCGCCTT CGCCCGGCGC
ATGGGCTGCG CGGTGCAGAG CGGCCCGGAA ATGGCTCGCG CCCAGCTCGG CAATCTCGGC
CACTTCATGG GCGTCACGCC CCTGGACATC TGA
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| Protein sequence | MFWKIRGRRI GPQQIQELEA RMIRGSTALV GIVGSPIAQV KSPENFNAWF AEHGQDLAML
PIDLQESSLD AFLATLRGWK NLRGCVVTVP YKQLLATRLD AVSERSTALR SVNVIRREAD
GRLVGDIVDG EGFLNAARRH AFEPGGKRAL VVGSGGVGSA IAYSLCEGGV SRLAIADLSA
ERVESLCALL RRAFPAIEIG GGHASLADFD LVVNASPVGM GDSGELPLPE SLLESLAKHC
LVADVVTSPE ITPLLAFARR MGCAVQSGPE MARAQLGNLG HFMGVTPLDI
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