Gene Avin_19490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_19490 
Symbol 
ID7760881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1942975 
End bp1943622 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID643804849 
Productouter membrane protein, OmpA/MotB family 
Protein accessionYP_002799133 
Protein GI226944060 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTC TCATTAATAG CAGCACCCTG ATTCTCTGCA TGGCCATCAC CGCCTGCAGC 
ACCACCGGCA AACAGGAACG TGTCGGCGCT CAGGCCGGCA GGTCCGGCTC GTCGGTAGCC
AATTTCGAAT CCAGGGAGAG TCGGGCCTGG GTCGCGGATC ACGAGGCGAG CGTACGCGAG
GCCGTCAAGG GGAGTCAGTT CGAGGTGGAG CGTCGTGGCG ATCTGCTGGT CGTGACGGCC
CCGGTGGACA GCTCGTTCAA CCCGGATCGG CCGAGCATGC TGCTGGTGGC GACCCTGGGC
CCGCTCAGCC GGGTGGCCAA GCTGGCGGCG CAGGATCGCG AAGTGGCCGT GCTGCTGCTG
GGGCATGGAG ACAGCAGCGG TTCGGCCGAG CTGACCAACA GGCTGAGCCA GGAGCGGGCG
CAGTCCATGG CGGCGATCTT CCGCATGAGC GGCCTGCACC ATGACCGCCT GATGTACAAG
GGGATGGGTT CCGATGTTCC GCGCTCCAGC AATGCCAACA AGGACGGGCG CTCTCTCAAT
CGCCGGGTGG AGATGTACCT GACCACCCGG AGCAGCCTGC CTGCCGTGCT GGCCCAGTAC
GGCGCGCCAG GAATTCGGGT GGTTGCTTCA GATCAAGCGA AGCGATAG
 
Protein sequence
MKLLINSSTL ILCMAITACS TTGKQERVGA QAGRSGSSVA NFESRESRAW VADHEASVRE 
AVKGSQFEVE RRGDLLVVTA PVDSSFNPDR PSMLLVATLG PLSRVAKLAA QDREVAVLLL
GHGDSSGSAE LTNRLSQERA QSMAAIFRMS GLHHDRLMYK GMGSDVPRSS NANKDGRSLN
RRVEMYLTTR SSLPAVLAQY GAPGIRVVAS DQAKR