Gene Avin_18500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_18500 
Symbol 
ID7760784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1829478 
End bp1830455 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content55% 
IMG OID643804748 
Productsodium:bile acid symporter family protein 
Protein accessionYP_002799037 
Protein GI226943964 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.292869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGGG ATGCACTGGA ACAGAATCAG ATACCGATCT ATTTCGTGGC GATCATTATC 
GCCGCGCTCG GTGGTCTTGT TGCACCGTCG GCAGCGGCGG GACTGGAAGC TCTGGTCACT
CCGACTATCG CTGTTTTGAT GTATGCGATG TTCCTGCAAA TCCCCTTCCT CCACTTGCGC
GAAGGTCTGA GCAGCAGGTC TTTCATGGGC GCCCTACTGG TTGCCAACTT TATCTTGATC
CCGCTCCTGG TGTGGGGTCT GACTCGTGCG CTATCTGGTC ACCCAGCCAT CCTGGCCGGG
GCGTTGCTGG TGTTGCTGAC GCCTTGCATC GACTATGTAG TTGTCTTCAC TCACATTGGA
AAAGGCAACT CCAAGCTGAT GCTTTCCGCT ACACCGATCT TGCTGTTGCT GCAACTCGTC
CTGTTGCCGC TCTATCTGGG CCTGATGCTC AGTGGTGTTT CCGGGGTAGT GGTGTCTATC
GGCCCGTTCA TCAAGGCCTT CCTCGCTCTG ATTGTGGCGC CTCTGGTCTT GGCATTACTT
ACTGAAGCCA TAGCCAAAAG GTCAGCTATC ATCAGGACAT GGACTGCTCT CTGGGCATGG
TTGCCGGTGC CAGCCATGGC TATCGTGCTC GTCGTTGTAG TCGGATCGCA GATCGCAGCC
GTTGTAAGCG ATATTGAAAA GTTGCTGCCA GTGATGCCGG TATATATCGG CTTCCTTTTC
TTGGCGCCGT TGGTCGGTGC GCTGGTTTCG AAGCTGTTCA AACTTCCAAC TGGCGCAGCA
AGGGCCGTGA CCTTCAGCGC TTCTACTCGC AATTCCCTGG TAGTTCTGCC GTTAGCCTTG
GCATTGCCTG AGGACATTCG CGGTCTTGCG GCGGCAGCGG TAATCACTCA GACCCTGGTC
GAGCTGGTTG GAGAGCTGAT CTATATCCGA GCGATACCGG CATTCGTTGG TCAGGATCAA
TCGTCTGCTA CAGGATAG
 
Protein sequence
MHRDALEQNQ IPIYFVAIII AALGGLVAPS AAAGLEALVT PTIAVLMYAM FLQIPFLHLR 
EGLSSRSFMG ALLVANFILI PLLVWGLTRA LSGHPAILAG ALLVLLTPCI DYVVVFTHIG
KGNSKLMLSA TPILLLLQLV LLPLYLGLML SGVSGVVVSI GPFIKAFLAL IVAPLVLALL
TEAIAKRSAI IRTWTALWAW LPVPAMAIVL VVVVGSQIAA VVSDIEKLLP VMPVYIGFLF
LAPLVGALVS KLFKLPTGAA RAVTFSASTR NSLVVLPLAL ALPEDIRGLA AAAVITQTLV
ELVGELIYIR AIPAFVGQDQ SSATG