| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16880 |
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| Symbol | |
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| ID | 7760623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 1675789 |
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| End bp | 1676499 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643804587 |
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| Product | 16S rRNA uridine-516 pseudouridylate synthase |
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| Protein accession | YP_002798877 |
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| Protein GI | 226943804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAC CCATCCGCCT CTCCAAACGC CTGATCGAGC TGTACCGTTG CTCGCGCCGA
GAGGCCGAGC TGTATATCGA GGGCGGCTGG GTCAGCGTCG ATGGACGGGC CGTCGAGGAG
CCGCAGTTCA AGGTCGGCGA CGAGGAAGTC GTCCTGCATC CGGATGCCGT GGCCACGCCG
GTCGAGCCGG TGACCCTGCT GCTGCACAAG CCGGCCGGCG AAACCCTCGA GCAGGCGCTC
GCCCGCCTCG GCCCGGCGAC GCGCGCGGAA AGCGACCGCG ACCCGCGGCG CCCGCTCTCC
CGGCACTTTC ACAGGCTCAC CGCACTGTTG CCGCTGGAAC CCGCGGCCAG CGGCCTGCAA
GTGTTCAGCC AGCAGCGCGG CGTGCTGCGC CGACTGGGCG AGGAAAGCGA CGCGCCAGAG
CAGGAATTCG TCGTCGAGAT CGCCGGCGAG CCGGCCGCCG ACGGTCTGGC CCGGCTCGGC
CACGGTCTCG ACCAGCGGGG CCGACCACTG CCGCCGTGCA AGGTCAGCCG ACAGAGCGAA
AGGCACCTGC GCTTCGCCCT CAAGGCGCCG CAGGCCGGGC AGATCGAACA CATGTGCCGC
AGCCTCGGGC TCGAAGTGCT GGCCCTGCGG CGCATCCGCA TCGGCCGCCT GGCGATGGCC
GGGCTGCCGG TGGGACAATG GCGCTACCTA GGCGAACGCG AGCGGTTCTG A
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| Protein sequence | MAEPIRLSKR LIELYRCSRR EAELYIEGGW VSVDGRAVEE PQFKVGDEEV VLHPDAVATP
VEPVTLLLHK PAGETLEQAL ARLGPATRAE SDRDPRRPLS RHFHRLTALL PLEPAASGLQ
VFSQQRGVLR RLGEESDAPE QEFVVEIAGE PAADGLARLG HGLDQRGRPL PPCKVSRQSE
RHLRFALKAP QAGQIEHMCR SLGLEVLALR RIRIGRLAMA GLPVGQWRYL GERERF
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