| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16270 |
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| Symbol | hrpA |
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| ID | 7760562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 1608506 |
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| End bp | 1612630 |
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| Gene Length | 4125 bp |
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| Protein Length | 1374 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643804527 |
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| Product | ATP-dependent DEAH box helicase HrpA |
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| Protein accession | YP_002798817 |
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| Protein GI | 226943744 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG CAATGCCCGC TTTCGACTCT CTCCTGAACA ACCTCGACCA CGCCCTGATC
GCCGATCGTC ACCGCCTGCG CCGCCAGCTC CACGAACTGC GCAAGAAGCC GGGGACGCCC
CAGTCCGACG AGGCGAGGCT GGCGCACTGG CTGGAGCGCT TCCAGGCCTC CTGCGCCAGG
GTCGAGGCGC GGCGGGCCAG CGTGCCGGCG CTGCGCTACG ACGACCAGTT GCCCATCGCC
GCCAAGCGCG AGGAGATCAA GGCGGCGCTT GAGAAACATC AAGTGCTGGT GATCGCCGGC
GAGACCGGCT CGGGCAAGAC CACCCAGTTG CCGAAGATCT GTCTGGAGAT CGGTCGCGGT
GCGCACGGGC TGATCGGCCA CACCCAGCCC CGGCGCCTGG CGGCGCGCAG CGTGGCGACC
CGGGTGGCGG AGGAGATCGG CTCGCCGCTG GGCGAACTGG TCGGCTATCA GGTGCGCTTC
GAGGACCAAT CCAACGAGCG CAGCCTGATC AAGCTGATGA CCGATGGCAT CCTGCTCGCC
GAGACCCAGC ACGATCGCTA CCTGGAGCGC TACGACACCA TCATCGTCGA CGAGGCCCAT
GAGCGCAGCC TGAACATCGA CTTCCTGCTC GGCTACCTGA AGACCCTGTT GCCGCGCCGG
CCCGACCTCA AGGTCATCAT CACTTCGGCG ACCATCGATC TGGAGCGTTT CTCCAGGCAC
TTCAACGCTG CGCCCATCGT CGAGGTGTCC GGGCGCACCT ACCCGGTGGA AACCTGGTAT
CGCCCGCTGG CCGCCGAGGT TGACGAGGAG GGCAACCGGG TCGAGGACGA CCTGAGCGTC
GACCAGGGCA TCCTCGCCGC CCTCGACGAG ATCGCCGCCC ACGAGCGCTC GGTCGGCAAG
CGTCCCGGCG ACGTGCTGGT GTTCCTGCCC GGCGAGCGCG AGATCCGCGA CTGCGCCGAG
GTACTGCGCA AGGCCAACCT GAAACACACC GAGGTCCTGC CGCTCTACGC TCGCCTGACC
CCGGCCGAGC AGCAGAAGAT CTTCCGCCCG GCGGCCGGGC GCAAGATCGT CCTGGCGACC
AACGTCGCCG AGACCTCGCT TACCGTGCCG GGCATCCGCT ACGTGATCGA TAGCGGCACG
GCGCGGATCA GCCGCTACAG CTACCGGGCC AAGGTCCAGC GTCTGCCCAT CGAGGCCGTC
TCCCAGGCCA GCGCCAACCA GCGCAAGGGC CGTTGCGGGC GGGTGGAGCC GGGCATTTGC
GTGCGCCTTT ACAGCGAGGA GGATTTCCTC GCCCGTCCGG AGTTCACCGA TCCGGAAATC
CTGCGTACCA ACCTCGCCGC GGTGATCCTG CAGATGCTCC ACCTGCGCCT GGGCAGCATC
GAGGATTTCC CCTTCATCGA GCCGCCGGAC GGCAAGGCGA TCAGCGACGG CTTCAACTTG
CTGCAGGAGC TGTCCGCGGT CACCCGCGAA GGCCAGCTCA CTCCGCTCGG CCGTCAACTG
GCGCGCCTGC CGGTGGACCC GCGCCTGGGC CGCATGCTGC TGGAGGCCGC CCGCCTGGGC
AGCCTGGAAG AGGTACTGAT CGTCGCCAGC GCGCTGTCCG TGCAGGACGT GCGCGAGCGC
CCGGCGGAAC GCCAGCAGGC CGCCGACCAG GCCCATGCCC AGTGGAAGGA CCCGGATTCC
GACTTCGCCG CGCTGATCAA CCTCTGGCGC GGCTTCGAGG AGCAGCGCCA GGCGCTGGGC
TCCAACGCCC TGCGTACCTG GTGCCGGAAG AATTTCCTCA ACTACCTGCG CCTGCGCGAA
TGGCGCGACG CCCACCGTCA GCTCGCGCTG ATCGTGCGTG AACTCAAGCT CGGCATGGGC
CAAGCGGTGG ATGGCTCCGG CCATCCACCC TACGCAAAAT CCGACTCCCG TAGGGTGGAC
AACGCCGAAG GCTTTTCCAC CGGACAGGGC CGTAGGGTGG ACAACGGCGA AGCCTTGGCC
AGCGAAGTGC CCGCCCCGAC TACCGACAAC AAGGTCAACG CCATCGTTCG CCAGCAGGCC
GAGGCCAGCG AGGCCGCGCA GAAGGTCAGG AACTACTCCG CCGTGCACAA GGCCATCCTC
TCCGGCCTGC TCAGCCAGAT CGGCCAGAAG ACCGAGGAGG GCGACTACCT CGGCGCCCGC
CAGCGGCGGT TCTGGATTCA CCCCTCCAGC GTGATCGGCC GCAAGAAGCC GGCCTGGGTG
ATGGCCGCCG AGCTGGTCGA GACCACCAAG CTGTTCGCGC GCATGGTGGC GAAAATCGAG
CCGGACTGGA TCGAGCCGCT GGCCGGCCAT CTGCTCAAGA AGAACCATTT CGAACCGCAC
TGGGAGAAGA AGCGCGGCCA GGTCGTCGCC TTCGAGCAGA TCACCCTCTA CGGGCTGATC
GTGGTCGGTC GCCGTCCGGT GCACTACGGG CCGGTCGATC CGCAGGTTTC CCGCGAGCTG
TTCATCCGCG AGGGGCTGGT GCGCGGCGAG ATCGCCAGCC GCGCCAGGTG CCTGAGCGCC
AATCGGGAAC TGCTGGAGTT GCTCGACGAA CTGGAGGCCA AGGCGCGCCG GCGCGACATC
CTCGCCGACG AGGAAACCCT GTTCGCCTAC TACGAGGCGC GCCTGCCGGC GGACATCTGC
CAGACCGCGA GTTTCGACGA CTGGTACCGG CGCGAGAGCG CGAAGGACCC GCAGCTTCTG
ATGATGCGCG AGGAGGACGT GCTGGCCCGC GACGCAAGCG AGGTCACCGC CGCGCAATAC
CCCGACAGCC TGCGCCTCGG CGAGCTGCAA TTGCCGCTGA CCTACCATTT CGAGCCGGGC
CATCCCCGCG ATGGGGTGAC CGTCCGCGTG CCGGCGCCGC TGTTGCCGCA ACTGCCGGCC
GAACGTCTCG ACTGGCTGGT GCCGGGCCTC CTGGAGGCCA AGTGCGTGGC CCTGGTGCGC
AACCTGCCCA AGGCGATCCG CAAGAACTTC GTGCCGGTAC CGGACTTCGT CAAGGCGGCG
CTGGCCAGGA TGGCCTTCGC CGAAGGCGCC TTGCCCGAGG CGCTGGGCCG CGAGCTCACG
CGCATGACCG GCGCCCGCGT GCCCGAGGAG GCCTGGGTGG AGGCCGCCGT CCAGCTCGAG
AATCACCTGA AGATGAACAT CGAGGTGGTC GATGCGCGCG GCAAGTTCCT CGGCGAGGGC
CGCGACCTGG CCGAACTGAC CGCCCGCTTC GCCGAGGCCA GCCAGGCGGC CCTGGCCATC
CCGCAACGCA AGGCCGACGC CGCGCCGGTC GAGGCCAAAG GCTTCGCCCC GCTGGCGGAA
AAGACCCAGC AGAAGATCGC CGGCCTCTCC ATGACGGTGT TCCCGGCGCT GGTGGAAGAG
GCCGGCACGG TGAAGGAGAA CCGCTTCCCG ACCCAGGCCG AGGCCGACTT CCAGCACCGC
CGCGCCCTGC AACGCCTGCT CCTGCAGCAA CTGGCCGAAC CGGCCAAGCA GTTGCGCGGC
AAGCTGCCAG GACTCACCGA GCTCAGCCTG CTGTACCGCG ACATGGGCAA GCCGGACGCC
CTGGTCGAGG ACATTCTTCT GGCCAGCCTC GACGCCAGCA TCCTCGACGG CGAGCCGCAA
CTGCCCCGCG ACGGTGCCGC GCTGGCCGCG CTGGCCGAGC GCAAGCGCGG CGCCTGGGCC
GAACAGGCCG GCCGCCTGGC GAAGCTGGTG CTGGACATCC TCAAGCTGCG CCACGACCTG
CAGAAGCGTT TCAAGGGGCG CATCGACCTG GCCCAGGCCG TTGCCCTCAA CGACATCAAG
GCCCAACTCG CCCGGCTCGT CTTCCCCGGC TTCGTCCGCG ACACGCCGGC CGACTGGCTG
CGCGAGTATC CCCGCTACCT CAAGGCCATC GAGCAGCGCC TCGACAAGGT CGGCGGCCAG
CTCCAGCGCG ACCGCGTCTG GAGTGGCGAA CTCGCCGCCC TCTGGGAGCA ATATCAGGCC
CGCGCCGCCA AGCACGCCCA GGAGGGCAAG CGCGACCCCG AGCTGACCCT GTATCGCTGG
ATGCTGGAGG AATACCGGGT ATCGCTGTTC GCCCAGCAAC TGGGGACCAG GATGCCGGTG
TCGGACAAGC GGCTGAGCAA GCAATGGGCG GCGGTGGAAA CCTGA
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| Protein sequence | MTDAMPAFDS LLNNLDHALI ADRHRLRRQL HELRKKPGTP QSDEARLAHW LERFQASCAR
VEARRASVPA LRYDDQLPIA AKREEIKAAL EKHQVLVIAG ETGSGKTTQL PKICLEIGRG
AHGLIGHTQP RRLAARSVAT RVAEEIGSPL GELVGYQVRF EDQSNERSLI KLMTDGILLA
ETQHDRYLER YDTIIVDEAH ERSLNIDFLL GYLKTLLPRR PDLKVIITSA TIDLERFSRH
FNAAPIVEVS GRTYPVETWY RPLAAEVDEE GNRVEDDLSV DQGILAALDE IAAHERSVGK
RPGDVLVFLP GEREIRDCAE VLRKANLKHT EVLPLYARLT PAEQQKIFRP AAGRKIVLAT
NVAETSLTVP GIRYVIDSGT ARISRYSYRA KVQRLPIEAV SQASANQRKG RCGRVEPGIC
VRLYSEEDFL ARPEFTDPEI LRTNLAAVIL QMLHLRLGSI EDFPFIEPPD GKAISDGFNL
LQELSAVTRE GQLTPLGRQL ARLPVDPRLG RMLLEAARLG SLEEVLIVAS ALSVQDVRER
PAERQQAADQ AHAQWKDPDS DFAALINLWR GFEEQRQALG SNALRTWCRK NFLNYLRLRE
WRDAHRQLAL IVRELKLGMG QAVDGSGHPP YAKSDSRRVD NAEGFSTGQG RRVDNGEALA
SEVPAPTTDN KVNAIVRQQA EASEAAQKVR NYSAVHKAIL SGLLSQIGQK TEEGDYLGAR
QRRFWIHPSS VIGRKKPAWV MAAELVETTK LFARMVAKIE PDWIEPLAGH LLKKNHFEPH
WEKKRGQVVA FEQITLYGLI VVGRRPVHYG PVDPQVSREL FIREGLVRGE IASRARCLSA
NRELLELLDE LEAKARRRDI LADEETLFAY YEARLPADIC QTASFDDWYR RESAKDPQLL
MMREEDVLAR DASEVTAAQY PDSLRLGELQ LPLTYHFEPG HPRDGVTVRV PAPLLPQLPA
ERLDWLVPGL LEAKCVALVR NLPKAIRKNF VPVPDFVKAA LARMAFAEGA LPEALGRELT
RMTGARVPEE AWVEAAVQLE NHLKMNIEVV DARGKFLGEG RDLAELTARF AEASQAALAI
PQRKADAAPV EAKGFAPLAE KTQQKIAGLS MTVFPALVEE AGTVKENRFP TQAEADFQHR
RALQRLLLQQ LAEPAKQLRG KLPGLTELSL LYRDMGKPDA LVEDILLASL DASILDGEPQ
LPRDGAALAA LAERKRGAWA EQAGRLAKLV LDILKLRHDL QKRFKGRIDL AQAVALNDIK
AQLARLVFPG FVRDTPADWL REYPRYLKAI EQRLDKVGGQ LQRDRVWSGE LAALWEQYQA
RAAKHAQEGK RDPELTLYRW MLEEYRVSLF AQQLGTRMPV SDKRLSKQWA AVET
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