| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_15670 |
|---|
| Symbol | scpB |
|---|
| ID | 7760502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1537203 |
|---|
| End bp | 1537994 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643804467 |
|---|
| Product | chromosome segregation and condensation protein B |
|---|
| Protein accession | YP_002798757 |
|---|
| Protein GI | 226943684 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGA ACGATCCGGC CGAACTGGCC GTACTGCTCG AGGCCTGGCT GCTCGCCGCC
GGCCGGCCGC TGTCGCTGGA GCGCCTCGGC GAACTGTTCG AGGAGGGCGA GCGGCCCGAA
CCGGCCTGCC TGCGCGACGC CCTGGCGATC CTCGCGCGCT CCTGCCAGGG GCGCGCCTTC
GAGCTGAAGG AAGTGGCCTC CGGCTATCGC CTGCAGGTGC GCGAGCGCTT CGCGCCCTGG
GTCGGGCGTC TCTGGGAGGA ACGGCCGCAG CGCTACTCGC GGGCCCTGCT GGAAACCCTG
GCGCTGATCG CCTACCGCCA GCCGATCAGC CGTGGCGAGA TCGAGGAAGT GCGCGGCGTG
GCGGTGAGCA GCAATATCAT CAGGACCCTG CAGGAGCGCG AGTGGATTCG GGTGGTCGGC
TACCGCGAGG TACCCGGCCG GCCGGCGCTG TTCGCCACCA CCCGCGCCTT TCTCGACCAT
TTCAACCTGA AGAGCCTCGA CGAGTTGCCG CCCCTGGCCG TTCTGCGCAG CCTGGAGCCG
GGGCCGGCCG GTGCGGCCGG CGAGGAGCCG CCGGTCGGCC CGCCGTTGGC CGGCGAAGCC
GCCGAACCGG CCGAGCGGAC CAGCTTCCGC ACCCTGCTGG CCGAACTGGA CGCCATGGAG
CAGGGCCTCA AGACCGACTT CGACGACCTG CCGGAGACGG ATGCCGGGGC CGAGGGCGGC
ATGCAGCAGG TGGCGGACGA TTCCCCGGCG GAACGGGCGG CTTGTCCATT TCCCGACGCT
GAGCCTAAAT GA
|
|---|
| Protein sequence | MNLNDPAELA VLLEAWLLAA GRPLSLERLG ELFEEGERPE PACLRDALAI LARSCQGRAF
ELKEVASGYR LQVRERFAPW VGRLWEERPQ RYSRALLETL ALIAYRQPIS RGEIEEVRGV
AVSSNIIRTL QEREWIRVVG YREVPGRPAL FATTRAFLDH FNLKSLDELP PLAVLRSLEP
GPAGAAGEEP PVGPPLAGEA AEPAERTSFR TLLAELDAME QGLKTDFDDL PETDAGAEGG
MQQVADDSPA ERAACPFPDA EPK
|
|---|
| |