Gene Avin_14250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_14250 
Symbolfcs 
ID7760361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1399038 
End bp1400918 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content71% 
IMG OID643804323 
Productferuloyl-CoA synthase 
Protein accessionYP_002798616 
Protein GI226943543 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCA AGGCTTGCGA GTCCCTTTTT CCTTCATCTC AGCCGCGCCT GCGTCCGGTG 
GCCATCGGCT CGCCGGGCGT CGTCCACGAG ACGGCGGACG GCTGCCTCTA CCTGCGTCCC
GTCGAGGCCC TGGCGCCTTT GCCGGCGCGC CTGCTCGACC GCCTGGAGCA CTGGGCGCGA
CTGACCCCCG AGCAGATCCT GGTCGCCCGG CGCGGCGACG ACGGGGAATG GCAACGCCTC
AGCTACGCGC AGATGCTGGA AAGCGCCCGG ACCATCGGTC AGCATCTGCT GGAGTACGGC
CTGAGCGCCG AACGGCCGTT GCTGGTGCTT TCCGGCAACG CTCTGGATCA CCTCAAGCTG
GCGCTCGCCT GCCTCTACGT GGGCATTCCC TACTGCCCGG TGTCGCCGGC CTATTCCACT
CTGTCCCAGG ACCTGGCCAA GCTGCGCCAC ATCGTCGAAC GCCTGCAGCC CGGCCTGGTG
TTCGCCGCGG ACGGCGCGAC CTACGCCCGC GCCATCGAAG GCACCATCCC GGCCGACGTG
CCGCTGCTGT TCAGCGAGGG CGTGCTGCCC GGCCGGCCCT GCCGCGCCTT CGCCGAGCTG
GAACGGCCGG TGGATACCGC CGGGGCGGAG GCCGCCTTCG CGCGGGTCGG CCCGGAGAGC
ATCGCCAAGT TCCTCTTCAC CTCGGGCTCG ACCAAGCTGC CCAAGGCCGT GCCGACCACC
CAGCGCATGC TCTGCGCCAA CCAGCAGATG CTGCTGCAGA CCTTCCCGGT GTTCGCCGAG
GAACCGCCGG TGCTGGTCGA CTGGCTGCCC TGGAACCACA CCTTCGGCGG CAGCCACAAC
GTCGGCATCG CCCTCTACAA CGGCGGCACC CTCTACATCG ACGACGGCAA GCCGACGCCG
CAGGGCTTCG CCGAGACCCT GCGCAACCTG CGCGAAATCT CGCCGACCGC CTACCTGACC
GTGCCCAAGG GCTGGGAGGA GCTGGTCGGC GCGCTGGAAA CCGACGACGA GCTGCGCGAA
CGCTTCTTCG CCCGCATGCG GCTGTTCTTC TTCGCCGCCG CCGGCCTCTC GCACTCGGTG
CGCGAGCGGC TGGACCGGGT GGCCGAGGCG CACTGCGGCG AGCGCATCCG CACCGTGGCC
GGGCTGGGCA TGACCGAGAC GGCGCCATCC TGCACCTTCA GCACCGGGGC GGTGGACCTG
CCCGGCTACG TCGGCGTACC GGCGCCGGGC TGCGAAGTCA AGCTGGCGCC GGTGGGCGAC
AAGCTGGAAG CGCGCTTTCG CGGCCCGCAC GTGATGGCCG GCTACTGGCG CGAGCCGGAA
CTCAGCGCCG AAGCCTTCGA CGAGGAGGGC TACTACCGCT CCGGCGACGC CCTCAGGCTG
GTCGACCCGG AACGGCCCGA GCTGGGCCTG CTGTTCGACG GGCGCATCGC CGAGGACTTC
AAACTCTCTT CCGGGGTCTT CGTCAGCGTC GGCCCGCTGC GCGCGCGGGT CATCCTGGCC
GGCGCGCCCT ATATCCAGGA CGTGGTGGTG ACCGGGCCGA ACCGGCCCGA GCTGGCCCTG
CTGATCTTCC CGCGCCTGCC CGAATGCCGG GCGCTGGCCG GCCTGCCGGA GTCGGCGCCG
GTCGCCGAGG TGCTGGCCTC GCCGGCGCTG CGTACCTGGC TGCGCGAACT GCTGGACGAA
CTCAACCGCG GCGCGACCGG CAACGCCAGC CGCCTGGCCT GGGCCTGCCT GCTCGCCGAG
CCGCCATGCA TCGATCGCGG CGAGGTGACC GACAAGGGCT CGATCAACCA GCGCGCCGTG
CTGCAGCACC GCGCCGCGCT GATCGATGCG CTCTACGCCG GCGAGGACGC CGGGCGGGTG
CTGCCGGGAG CCGGGGCATG A
 
Protein sequence
MNSKACESLF PSSQPRLRPV AIGSPGVVHE TADGCLYLRP VEALAPLPAR LLDRLEHWAR 
LTPEQILVAR RGDDGEWQRL SYAQMLESAR TIGQHLLEYG LSAERPLLVL SGNALDHLKL
ALACLYVGIP YCPVSPAYST LSQDLAKLRH IVERLQPGLV FAADGATYAR AIEGTIPADV
PLLFSEGVLP GRPCRAFAEL ERPVDTAGAE AAFARVGPES IAKFLFTSGS TKLPKAVPTT
QRMLCANQQM LLQTFPVFAE EPPVLVDWLP WNHTFGGSHN VGIALYNGGT LYIDDGKPTP
QGFAETLRNL REISPTAYLT VPKGWEELVG ALETDDELRE RFFARMRLFF FAAAGLSHSV
RERLDRVAEA HCGERIRTVA GLGMTETAPS CTFSTGAVDL PGYVGVPAPG CEVKLAPVGD
KLEARFRGPH VMAGYWREPE LSAEAFDEEG YYRSGDALRL VDPERPELGL LFDGRIAEDF
KLSSGVFVSV GPLRARVILA GAPYIQDVVV TGPNRPELAL LIFPRLPECR ALAGLPESAP
VAEVLASPAL RTWLRELLDE LNRGATGNAS RLAWACLLAE PPCIDRGEVT DKGSINQRAV
LQHRAALIDA LYAGEDAGRV LPGAGA