Gene Avin_12890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12890 
Symbol 
ID7760231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1253428 
End bp1253736 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID643804191 
ProductSTAS family protein 
Protein accessionYP_002798490 
Protein GI226943417 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG CTTCGATTCT TCAGGCCGAG CCTGGCGTGC TTGCCCTTTC CGGAGTGCTT 
GACTATGGCA CCGGGCCGGC TCTGCGTCAG CAGGGACGGG CCCTGATCGG TACCGCCGGA
ACTGACGGTT TGGTGCTCGA TTGCTCGGCT GTGGAAAAAT CCAGTAGTGT CGGGGTATCC
CTGCTGCTGG CGTATCTGCG CGATGCCAAG GCTGCCGGCA AGCGCCTGCA GGTGCGGGCG
CTGCCCGAGG ATATGTGCGA GATCGCCCAG GTTTGTGGGT TGCTCGAGCT CTTGCCGCTG
GAAGCGTGA
 
Protein sequence
MSEASILQAE PGVLALSGVL DYGTGPALRQ QGRALIGTAG TDGLVLDCSA VEKSSSVGVS 
LLLAYLRDAK AAGKRLQVRA LPEDMCEIAQ VCGLLELLPL EA