Gene Avin_12460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_12460 
Symbol 
ID7760189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1212941 
End bp1213615 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID643804149 
Productallophanate hydrolase subunit 1 
Protein accessionYP_002798448 
Protein GI226943375 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.460318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTCG AACCCGCCGG CCCCGAAGCC CTGCTGCTGG TCCTGGCCGA CCAGCCGGAC 
GCCGGCCTGC CGCTGCGCAT CGCCGCCCTG GCCGATCTGA TCCAGCTCGA ACTGGGGCCG
CTGGTCGTCG ATCTGGTGCC CGGTTGGACC ACCCTGCTGC TGCATTACGA TCTGCTGCGG
ACCGATCATC TGCAGCTCAG CAGGCGCCTG TTGCCCCTGC TCGAGGACTG GTGCGTGCAG
GCGCAGCCTT CCCGCAGCGG GCATCTGCAC GAGATCCCCG TCTGGTATGC CGGCGAGGAC
CTGGCCGAGG TGGCCCGCGC CTGCGCCCTG AGCGAGGCCG AGCTGATCGC CCTGCACAGC
GGCGTGGAGT ACCGGGTCGG CGCCATCGGC TTCGCCCCGG GCTTCGCCTA CCTCGGCGAA
CTGGACGCGC GCCTGTCCCT GCCGCGCCGG CGCACGCCGC GCACCCGGGT ACCGGGCGGC
TCGCTGGCCA TCGCCGAGCG GCAGACGGCG ATCTATCCCC AGACTTCGCC GGGGGGCTGG
CACCTGATCG GGCGTTGTCC GTGGCGCCTG TTCGACGCCC AGGCCGAGCC GCCCTGCGCG
CTGGCGGTGG GCGACCGGGT GCGTTTCCTG GCCATCGACG AAGCGGCCTT TCGCGCCGAG
GGCGGTGCGC CGTGA
 
Protein sequence
MRLEPAGPEA LLLVLADQPD AGLPLRIAAL ADLIQLELGP LVVDLVPGWT TLLLHYDLLR 
TDHLQLSRRL LPLLEDWCVQ AQPSRSGHLH EIPVWYAGED LAEVARACAL SEAELIALHS
GVEYRVGAIG FAPGFAYLGE LDARLSLPRR RTPRTRVPGG SLAIAERQTA IYPQTSPGGW
HLIGRCPWRL FDAQAEPPCA LAVGDRVRFL AIDEAAFRAE GGAP