Gene Avin_12230 details

Gene Information

• Locus tag: Avin_12230
• ID: 7760166
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 1179861
• End bp: 1180571
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643804126
• Product: transposase
• Protein accession: YP_002798425
• Protein GI: 226943352

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGCC TGCGAAAGCG CCATCTCTGG CAAGGCTATG CCGAGGCGTT GACCCAGAGC 
CTGACGGTAC GCAGGGCGGC GAAACACTGT GGCGTCAGTA AGAACACAGC CTTCCTGTGG 
CGACACCGGT TCCTGACCCA GATCGCCGAT CACCAGGCTC AGCATGAGTC CGGGATTGTC 
GAGGCCGATG AAACCTTCTT CCTGGAGTCT TTCAAGGGAC AGCGAGACTT GCCGCGCCCA 
CCTCGCAGGC GCGGAGGCAG CGCGAAGCAA CGCGGGTTGT CTGCCGAGCA GATTCCTGTC 
CTGGTGGTGA GAGATCGCAG CGGCCAGCAT GCCGACTTTC AGCTGAAGAA GCTCGATGCC 
GTGCATGTCA GGGAGCGACT ACGCCCCCTG ATCGATGCTG ATGCGATTCT TTGCTCTGAC 
AGTGCCGCCG TCTATGCCCA CTTTGCCAAG GCAGAAGGCA TCACCCATCA GCCGGTCAAT 
CCGAGCCAGA AGCGCAGGGT CGATGGGCCT TTTCACATCC AGAACGTGAA CGCCTATGAC 
AGCCGACTGA AGAGCTGGAT GATTCCCTTT CATGGGGTGG CCACCAAGTA TCTGACCCAT 
TACCTGGGAT GGCGCCGCCT GCTCGAACGC TACAAGACGC AGCTCAATCC ATTGATTTGC 
TTGAGGGAGG CGCTGGGGCG AGTAGCCATG CAACAGCTAA CTCAGACATA G 

 

Protein sequence

MARLRKRHLW QGYAEALTQS LTVRRAAKHC GVSKNTAFLW RHRFLTQIAD HQAQHESGIV 
EADETFFLES FKGQRDLPRP PRRRGGSAKQ RGLSAEQIPV LVVRDRSGQH ADFQLKKLDA 
VHVRERLRPL IDADAILCSD SAAVYAHFAK AEGITHQPVN PSQKRRVDGP FHIQNVNAYD 
SRLKSWMIPF HGVATKYLTH YLGWRRLLER YKTQLNPLIC LREALGRVAM QQLTQT