Gene Avin_11970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_11970 
Symbol 
ID7764112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1151477 
End bp1153276 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content68% 
IMG OID643804101 
ProductABC transporter, transmembrane permease and ATP binding components 
Protein accessionYP_002798400 
Protein GI226943327 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCAA AAAGCAAGTC CGCTCCCCGC CGACGGCTGC AACTGCCGAG CCGTCCACTA 
CCCTTTCTCT GGCGCTATGT GCGCCGGCGC CCCTGGCATT TCGGCCTGAT GTTCGCGCTG
ATCGTCGGCG CCGCCGGAAG CGCGGTGGCG GTGCAGTACG GCATGAAGCT GCTGGTCGAT
GCCATGACCA CGGCCGACCG CCTGGCCGCC GACGTGTGGA CGCCATTGGC GCTGTTCCTC
GGCCTGATCA TCGCCGAGAA CGCCTTCTGG CGTCTCGGTG GCTGGCTCGG CTGCCAGACC
GTGGTGGCCA GTTGCGTGGA TATCCGCGTC GAGCTGTTCC GCTATCTGAC CGGCCACCCG
ATGCGCTACT TCAACGAGCA CTTCGCCGGC GCCCTGGGCA ACCGCATCAC CGCCACCGGC
TCGGCGGCCG GCACCATCTA CGGCGGCTTC GCCTGGAAGA TCATGCCGCC CCTGGTCGAT
TTCGCCGGTG CCGTGGTGGT GCTGCTCACC GTCGACTGGC GCATGGCCCT GACGTTGATC
GGCGCCGTGC TGCTGATCGC CCTGCTGATC ACCAACTACG GCATCCGCGG CCGCACCAGG
CACCAGCGCT ACGCCGCCCA GGCCGCGCAT GTCGGCGGCG AACTGGTCGA TGCGGTGTCC
AACGTCTGGA CCATCAAGGC TTTCTCCGCC CGCGACCGCG AGAGCGAGCG GCTGGCGCAG
AAGATCGGCA GCGAGGCCCA TGCCCATCGC AAGAGCTGGA TGTACATGGA GAAGGCGCGC
CTGCTGCACG ACGTCTGCCT GTCACTGATG GCCGGCGGCA TGCTGGTCTG GGCCATCCAG
CTATGGCGCG CCGGCAGCGT CAGCGCCGGC GACGTGGTGC TGGTCAGCGC GCTGACCTTC
CGCATCCTGC ACGGCTCGCG CGACCTGGCC CTCGCGCTGG TGGATACAAC CCAGCAGCTC
GGCGCCATCG CCGATACCCT GCGCATCATC GTCCAGCCCC ATGCCCTGCA CGACCCCGAC
CAGCCGCTGA CCGCCGCCGA CGGCACCATC GACCTGATCG ACGTGGGCTA CCGCTACCCG
GACGACCGCC AGGTATTCAA GGACTTCAAC CTGCACATCC CGGCCGGGCA GAAGATCGGC
CTGGTCGGCC CAAGCGGGGC CGGCAAGTCG ACACTGGTGT ACCTGATCCA GCGCCTGGAC
GATGTCCAGG AGGGCAGTAT CCGCATCGAC GATCACGATA TCCGCCAGGT CAGCGTGGAC
AGCCTGCGCC AGATGATCGC CGTGGTGCCC CAGGAAACCG CGCTATTCAA CCGCAGCATC
CGCGAGAACA TCCGCTACGG CCGCCCCGAG GCCAGCGACG AGGAGGTCGA GGAGGCGGCG
CGCATGGCCT ATTGCGATGC CTTCATCCGC GAGCTGCCAC GGGGCTACGA CACCCAGGTC
GGCGAGCGCG GGGTGATGCT CTCCGGCGGT CAGCGCCAGC GTCTGGGGAT CGCCCGTGCC
TTCCTCAAGG ACGCACCGAT CCTGATTCTG GACGAGGCCA CCTCGGCCCT CGACACTCAT
TCCGAGGCGG AGATCCAGGT CGCCCTGGCC GATCTGGTGC GCGACCGCAC GGTACTGGCG
GTGGCACACC GATTGTCCAC CGTAGCCAAT TTCGACCGCA TCCTGGTGAT GCAGAAAGGC
AAGGTGGTGG AGGACGGCAG CCCGGCCGAA CTGCTTGCCC GCGACGGCCT CTACGCTTCG
CTGTGGCGGA TGCAGGCCGA GGGCTTCCTG CGCGACCCCA AGCTGCCGAC GGTCGGCTGA
 
Protein sequence
MSPKSKSAPR RRLQLPSRPL PFLWRYVRRR PWHFGLMFAL IVGAAGSAVA VQYGMKLLVD 
AMTTADRLAA DVWTPLALFL GLIIAENAFW RLGGWLGCQT VVASCVDIRV ELFRYLTGHP
MRYFNEHFAG ALGNRITATG SAAGTIYGGF AWKIMPPLVD FAGAVVVLLT VDWRMALTLI
GAVLLIALLI TNYGIRGRTR HQRYAAQAAH VGGELVDAVS NVWTIKAFSA RDRESERLAQ
KIGSEAHAHR KSWMYMEKAR LLHDVCLSLM AGGMLVWAIQ LWRAGSVSAG DVVLVSALTF
RILHGSRDLA LALVDTTQQL GAIADTLRII VQPHALHDPD QPLTAADGTI DLIDVGYRYP
DDRQVFKDFN LHIPAGQKIG LVGPSGAGKS TLVYLIQRLD DVQEGSIRID DHDIRQVSVD
SLRQMIAVVP QETALFNRSI RENIRYGRPE ASDEEVEEAA RMAYCDAFIR ELPRGYDTQV
GERGVMLSGG QRQRLGIARA FLKDAPILIL DEATSALDTH SEAEIQVALA DLVRDRTVLA
VAHRLSTVAN FDRILVMQKG KVVEDGSPAE LLARDGLYAS LWRMQAEGFL RDPKLPTVG