Gene Avin_11230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_11230 
Symbol 
ID7760066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp1071897 
End bp1072961 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content67% 
IMG OID643804026 
Productcation transporter 
Protein accessionYP_002798328 
Protein GI226943255 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.482612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT GCAACCATGA ACACTGGCGG TCTTCCCACG ACTACCGCCC GCTGGAGGCC 
GGCAGCGAGC GCCAGGCCTG GCTGGTGGTG GCCCTGACCG GGGTCACCAT GCTGCTGGAG
ATCGCCGCCG GTTACGGATT CAACTCCATG GCGCTGCTGG CCGACGGCTG GCACATGGCT
TCGCACATGG TGGCGATCGG CCTGACCGCC GTGGCCTATC TGCTCGCCCG GCGCTACCTG
CGGGACCCGC GCTTCGCCTT CGGCACCTGG AAGATCGAGG TGCTGGCCGG CTTCGCCAGC
GCGCTGCTGC TGGTAGTGGT GGCGTTCCTG ATGCTCGTCG AGTCGTTCTG GCGGCTCTGG
GAGCCCCGCG AGATCGCCTT CGATCTGGCG CTCTGGGTGG CGGCGCTCGG CCTGGCGGTC
AACCTGCTGT CGGCCTGGCT GCTGCGCGAC CAGCACGATC ACCATGGACA TGCCCACGGG
CACCATCAGC ATGCCGACCA TGACCATGAC CATGACCATG ACCATGACCA TGACCATGAC
CATGACCATG ACCATGACCA TGACCATGAC CATGACCATG ACCATGACCA TGACCATGAC
CATCACGGTC ACGGCCACCG CGATCTCAAC CGCCACGCCG CTTACCTGCA CGTGCTGACC
GATGCGCTCA CCTCGGTGGC GGCCATCGTC GCGCTGCTCG GCGGCAAGCT CTTCGGCTGG
AACTGGCTGG ACCCGCTGAT GGGCATCGTC GGCGCGCTGG TGATCGGCGT CTGGGCCAGA
GGCCTGCTGG TCGAGACCGG CAAGGTGCTG CTCGACCGGG AGATGGACAG CCCGCTGGTG
GCGCGGGTGC GCGCCACGCT GGAACGCGAG CCGGACACCG AGGTGGCCGA CTTGCACCTG
TGGCGCGTCG GCCGCGCCCA GTACGCCTGC ATCCTCAGTG TGGTGACCCA TGGCGACAAC
AGCGCGGACC GCTACAAGGC CTGTCTGACG GGCATTTCCG GGCTGGTTCA CGTGACCGTG
GAGGTGAATC GCTGCGAGGT GGGACAGGCA GGCGGGCGAG GGTGA
 
Protein sequence
MIECNHEHWR SSHDYRPLEA GSERQAWLVV ALTGVTMLLE IAAGYGFNSM ALLADGWHMA 
SHMVAIGLTA VAYLLARRYL RDPRFAFGTW KIEVLAGFAS ALLLVVVAFL MLVESFWRLW
EPREIAFDLA LWVAALGLAV NLLSAWLLRD QHDHHGHAHG HHQHADHDHD HDHDHDHDHD
HDHDHDHDHD HDHDHDHDHD HHGHGHRDLN RHAAYLHVLT DALTSVAAIV ALLGGKLFGW
NWLDPLMGIV GALVIGVWAR GLLVETGKVL LDREMDSPLV ARVRATLERE PDTEVADLHL
WRVGRAQYAC ILSVVTHGDN SADRYKACLT GISGLVHVTV EVNRCEVGQA GGRG