| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_09340 |
|---|
| Symbol | |
|---|
| ID | 7759882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 882596 |
|---|
| End bp | 883795 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643803846 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002798148 |
|---|
| Protein GI | 226943075 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.035454 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGGC CTTTCGTCAT TCTCAGTCAC GTCGCCACCC ATGCCGTCTG CGAAGGCTTC
CTGCCTGCCG CGCAGCGGCG CGGGCATCCG CTGCTGCTCA TCACCGACCA TGCCCAGGGG
CATTGGCGCC ATCTGGCCGA GGCCGGGGTT TCGGTCGACG GGCTGGAGAT CCTCGAATGC
GACGTCTTCA ACCCGCTGGC GGTGATCGAG TCGCTGCACG CCCATGGGCA ACGCCCGCTG
GCGGTGTTCT CCAACAGCGA TCACCTGCAG ACCAGTTGCG CCCTGGTGGC CGAAGCCTTC
GACTGCCCCG GCAAGGACTG GCGGACCTGC CACGCGGCGA AGAACAAGGC GGAGATGCGC
GAGCGCCTGC AGCGCCTCGG CCTTCCCGGC CCCTGGTTCC GGGTGCTGAC CCCCGGCGCG
GCGCTGCCGG CGGACGCCCC CTTCCCGCTG GTGGCCAAGC CGCGCGAGGG CGTCGCCAGC
CTGGACGTGC AGTTGTGCCG CGACGCCGGC GAACTGGCCG CCTACTGCGA AGCCTTCTGG
CAGCGCCAGC CGAACCGCGC GCTGCTGCTC GAAGCCTACC TGGAAGGACC GCTGTTCACC
CTGGAGACCC TCGGCGACGG CCAGCGCCTG CAGGCCATCG GCGGCTTCGA CGTGACCCTC
TCGTCACCGC CGCACTTCGT CGAGCTGGAG GCGCGCTGGA ACGGCCCGCT GGGTCGGGCG
GCACGTAACG CCGCGCTGGC CCAGGTCGCC GCCTTCGGGG TCGACTTCGG CGTCTGCCAC
AGCGAATTCA TCCTCACCGC CGACGGCCCG GTGCTGGTGG AGATCAACTA CCGCAGCATC
GGCGACGGCC GCGAATTCCT CCTCGACCGC CTGCTGCCGC AGGGCTGGTT CGAACGCATC
CTCGACCTGC ACCTGGGCGG CACCCTGGCC GACAACCAAA GCAGCAGCGC CGAAGCCCTG
GTGCACTACC TGGTCGCCCC GCGCGCCGGC CGTCTGCTGG CGGCCAGCCC GAGCTTTCGC
GACGAAGGCG ACGGCCATTG GGTCGACTAC TGCGCGCTGC GCGAGGTCGG CGAAGAGATC
CGCCTGAGCA ACTCGAACAA GGACTACCTG GGCGTGCTGC GCCTGATCGC CCCCGACGCG
GCCGCCCTCG CGGCACGCTT CGATGCCGTG CGCAGCGACC TGCGCTGGGA GCTGGCATGA
|
|---|
| Protein sequence | MQRPFVILSH VATHAVCEGF LPAAQRRGHP LLLITDHAQG HWRHLAEAGV SVDGLEILEC
DVFNPLAVIE SLHAHGQRPL AVFSNSDHLQ TSCALVAEAF DCPGKDWRTC HAAKNKAEMR
ERLQRLGLPG PWFRVLTPGA ALPADAPFPL VAKPREGVAS LDVQLCRDAG ELAAYCEAFW
QRQPNRALLL EAYLEGPLFT LETLGDGQRL QAIGGFDVTL SSPPHFVELE ARWNGPLGRA
ARNAALAQVA AFGVDFGVCH SEFILTADGP VLVEINYRSI GDGREFLLDR LLPQGWFERI
LDLHLGGTLA DNQSSSAEAL VHYLVAPRAG RLLAASPSFR DEGDGHWVDY CALREVGEEI
RLSNSNKDYL GVLRLIAPDA AALAARFDAV RSDLRWELA
|
|---|
| |