| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_08880 |
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| Symbol | |
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| ID | 7759837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 840717 |
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| End bp | 842411 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643803801 |
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| Product | sigma54-dependent activator protein, XylR/DmpR family |
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| Protein accession | YP_002798103 |
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| Protein GI | 226943030 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.493647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAA TCGATACGGC GCCGGCGTTG ATACCGGCAT TCAAGGATCT CACTGGGCAG
ATTCGCTTCG TCGAAAAAGA AGGCAAGATC TGGCTCGGCC AGCAGCGCAT GCTGCTGTTG
CAACTCTCGG CGCTGAGCGC CGTTCGTCGC GAAATGATCG AGAGTATCGG CGTGGAGCGC
GCCAAGGGCT TTTTCCTGCG CCTGGGCTAC AAGTCCGGTC TCCGGGATGC CGAGCTGGCG
CGCAAGCTGC GCCCCGATGC CAGCGCGCTG GAGATGTTCT ACGCCGGTCC GCAGTTACAT
TCGCTCAAGG GCATGGCCAA GGTCAGGCCG CTGGAAATCC GCATCGACCA GGAGAGCGGG
GCGTTCTATG CCGACCTGGA ATGGGAGAAC TCCTTCGAAG TGGAAAGCTG CCGGGCCGAG
GGGCTGCACA GCGACCAGCC GGTGTGCTGG ACCCTGCTCG GCTACGCGAT CAGCTTCACC
TCGTTCTTCC TTGGCCGGCA AATCCTGTTC AAGGAGGTCA GTTGTCGGGG GCGCGGCGAT
GCGCAGTGCC GCATCGTCGG CAAGCCGGTG GGCGAATGGG AGGATGCCGA GGATTTCCTC
CGGTATTTCC GGAACGATCC CATCATCGAT GAGTTGCAGC TCCTGCAGGA GCAGGTGGCG
AACATGCGCC AGCGTCTGCA GGAGCAAGCC GGCCTGTTCT ACGGCGTCGG CCGCTCCGGC
GTCTATCGCA AGACCTGCAG CCTGATCGAC AAGGTTGCCC TGGGAAACGC TTCCGTGCTG
CTGCTGGGCG AGACCGGCGT GGGCAAGGAG GTCATCGCCC GCAGCCTGCA CCTGCGCAGC
GAGCGCGCCG GTGGTCCCTT CGTCGCGCTG AACTGCGCGG CGATCCCGCC GGATCTGATC
GAAGCCGAGC TGTTCGGCGT GGAGAAGGGC GCCTACACCG GCGCCCAGCA GTCGCGCATG
GGCCGCTTCG AGCGCGCCAA CGGCGGCACC CTGTTCCTCG ACGAGGTCGT CGAGCTGACC
CCGCGCGCCC AGGCCAGCCT GTTGCGCGTG CTCCAGGAAC GGGAGCTGGA GCGGGTCGGC
GACTCGCAGA CGCGGCAGGT CGATGTGCGG GTCGTCGCCG CCACCCATGA GGATCTGCTC
AAGGCGGTCG GGGAAGGGCG TTTCCGCGCC GACCTGTATT ATCGGTTGAA CGTCTACCCG
GTCCACATTC CCGCGCTGCG CGAGCGTCGG GAGGATATTC CGCTGCTGAT CGAGCATTTC
CTCGAGAAAA TGCATGCCAG CTACCGGAAG AAGACCCTGG GGCTTTCCGA CCAGGCCCTG
GAGACCTGCC TGGGCTACGA CTGGCCGGGC AATATCCGCG AACTGGAGAA CCTGATCGAG
CGCGGTGTGA TCATCACCGA GCCCAATCGG AGCATCGAGG TCGAAGCGCT TTTCCCCCAT
TTCCAGGTGG AACCGCAGGG GATCGGCCTG GCCAGCGACG GCTGCCTGGC GGAACGTTCC
GCCGGGGTTG AGGACGATTG CATCGAGCGG CTGCTCGACC AGGGAATAGG GCTGGATTCG
ATCGAGGATG CGCTGATCCA TGGCGCCCTC CGACGCAGCG GCCAGAACGT CTCGGAAGCC
GCCCGGCTGC TGGGCATGAC CCGCCCGGCG CTGGCTTATC GTTTGAAGCG CAGGGGAGAT
GCGAGGGATC GCTGA
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| Protein sequence | MKPIDTAPAL IPAFKDLTGQ IRFVEKEGKI WLGQQRMLLL QLSALSAVRR EMIESIGVER
AKGFFLRLGY KSGLRDAELA RKLRPDASAL EMFYAGPQLH SLKGMAKVRP LEIRIDQESG
AFYADLEWEN SFEVESCRAE GLHSDQPVCW TLLGYAISFT SFFLGRQILF KEVSCRGRGD
AQCRIVGKPV GEWEDAEDFL RYFRNDPIID ELQLLQEQVA NMRQRLQEQA GLFYGVGRSG
VYRKTCSLID KVALGNASVL LLGETGVGKE VIARSLHLRS ERAGGPFVAL NCAAIPPDLI
EAELFGVEKG AYTGAQQSRM GRFERANGGT LFLDEVVELT PRAQASLLRV LQERELERVG
DSQTRQVDVR VVAATHEDLL KAVGEGRFRA DLYYRLNVYP VHIPALRERR EDIPLLIEHF
LEKMHASYRK KTLGLSDQAL ETCLGYDWPG NIRELENLIE RGVIITEPNR SIEVEALFPH
FQVEPQGIGL ASDGCLAERS AGVEDDCIER LLDQGIGLDS IEDALIHGAL RRSGQNVSEA
ARLLGMTRPA LAYRLKRRGD ARDR
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