Gene Avin_07760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_07760 
Symbol 
ID7759728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp734473 
End bp735069 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content73% 
IMG OID643803695 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002797997 
Protein GI226942924 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTTCG CCGCCGCCCG CCACTGGGTG TTCGACATGG ACGGTACCCT GACCGTCGCC 
GTCCATGATT TCGCCGCCAT CCGCCGCGCC CTGGAGATCC CGCCGGAGGA CGACATCCTC
CACCACCTGG CGGCCCTGCC GGCGGAGCAG GCGCTGGCCA AGCGTGCCTG GCTGCTCGAA
CACGAACGCG CCCTGGCCCT GGGCGCGCGT CCGGCCGCCG GCGCGGTGGA ATTGGTGCGC
ACGCTGTGCC GGCGCGGCTG CCGGCTCGGC CTGCTGACGC GCAACGCCCA CGAATTGGCG
CTGCTCACCC TGGCGGCGAT CGGCCTGGCC GACTGCTTCG CCGGTGTGGA TATCGTCGGT
CGCGACGAGG CGCCGCCCAA GCCGCATCCC GGCGGCCTGC TGCAACTGGC CGCGGCCTGG
GGCGTGGCGC CCGCGGAGCT GGTGATGGTC GGCGACTACC GCAACGATCT GGAGTGCGCG
CGCGGCGCGG GGGCGCACGC CGTGCTGATC CGCCCGACGG AAAATCCCTG GCCCGAACTG
ACCGACTGGC AGGTGCGCGA CTGTTTCGAA CTGCTGGCGC AACTGCGCGG CGAGTGA
 
Protein sequence
MRFAAARHWV FDMDGTLTVA VHDFAAIRRA LEIPPEDDIL HHLAALPAEQ ALAKRAWLLE 
HERALALGAR PAAGAVELVR TLCRRGCRLG LLTRNAHELA LLTLAAIGLA DCFAGVDIVG
RDEAPPKPHP GGLLQLAAAW GVAPAELVMV GDYRNDLECA RGAGAHAVLI RPTENPWPEL
TDWQVRDCFE LLAQLRGE