Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_06630 |
Symbol | |
ID | 7759617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 632786 |
End bp | 634051 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643803585 |
Product | ABC efflux transporter, permease protein |
Protein accession | YP_002797889 |
Protein GI | 226942816 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.949424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCTGT TGCGCCTGGC CCTGGCCAGT CTGGCCAACC GCCGCGCCAC CGCCCTGCTC ACGGTATTCG CCATCGCCGT CTCGGTCTGC CTGCTGCTCG CCGTCGAACG GGTGCGCACC GAGGCCCGCG CCAGTTTCGC CAGCACCCTG AGCGGCACCG ACCTGATCGT CGGTGCCCGT TCCGGCCCGG TGAATCTGTT GCTCTATTCG GTGTTCCGTA TCGGCAACGC CACCAACAAC ATCCGCTGGG AGAGCTTCCG GCACTTCGCC GAGCATCCAC GGGTGAAATG GGCGATCCCG CTGTCGCTCG GCGATTCGCA TCGCGGCTAC CGGGTGCTGG GCACCACGGT GGCCTACTTC GAGCACTACC GCTACGGCCG CCGGCAGCCG CTGGAATTGA GGGAAGGCCG TGCCTTCGCC ACGGACCCGT TCGAGGTGGT GCTCGGCGCC GAGGTGGCCG AGGCACTGCA CTACAAGCTG GGCGACGAAC TCGTGCTGGC CCACGGCGTG GCCAGGATCA GCCTGACCCG CCACGAGGAC AAGCCGTTCC GCGTGGTCGG CATCCTCGGC CGCACCGGCA CGCCGGTCGA TCGTACCCTG CATATCGGCC TGACCGGCAT GGAAGCGCTG CACATCGACT GGCGCGGCGG CGTGCCGGCC CGGGGCGGCG CGCGCATCGA CGCCGAGCAG GCGCGCCGGA TGGACCTGCA GCCCAAGGCG ATCACCGCCT TCCTGCTCGG CCTCGACAGC CGGATCGCCA CTTTCGCCAT GCAGCGGGAA ATCAACGACT ACCTCGGCGA GCCGCTGCTG GCGATCCTCC CCGGGGTCGC CCTGCAGGAG CTGTGGAGCC TGATGGGCAC TGCGGAGCAG GCCTTGTTCG TGGTCTCGCT GTGCGTCGTG CTGACCGGGC TGATCGGCAT GCTCACGGCG ATCCTCGCCA GCCTCAACGA ACGCCGCCGG GAGATGGCGA TCCTCCGCTC GCTGGGCGCC CGGCCCTGGC ACATCGCCGG GCTGCTGGTG CTGGAAGCCT TCGCGCTGGC CCTGGCCGGC GTGCTGCTCG GCCTGGCCCT GCTCTATCTC GGCATCCTGC TGGCCCAGGG ACCGCTGCAG GCGGCCTACG GACTCTACTT GCCGTTCGCT GCGCCGAGCA CCTATGAATG GCTGCTGCTC GGTGCCATTC TGGCTGCGTC GCTGCCGCTC GGCGCGATAC CGGCCTGGCG CGCCTATCGC CAGTCGCTGG CCGACGGTCT GTCCATTCGC CTGTGA
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Protein sequence | MHLLRLALAS LANRRATALL TVFAIAVSVC LLLAVERVRT EARASFASTL SGTDLIVGAR SGPVNLLLYS VFRIGNATNN IRWESFRHFA EHPRVKWAIP LSLGDSHRGY RVLGTTVAYF EHYRYGRRQP LELREGRAFA TDPFEVVLGA EVAEALHYKL GDELVLAHGV ARISLTRHED KPFRVVGILG RTGTPVDRTL HIGLTGMEAL HIDWRGGVPA RGGARIDAEQ ARRMDLQPKA ITAFLLGLDS RIATFAMQRE INDYLGEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLCVV LTGLIGMLTA ILASLNERRR EMAILRSLGA RPWHIAGLLV LEAFALALAG VLLGLALLYL GILLAQGPLQ AAYGLYLPFA APSTYEWLLL GAILAASLPL GAIPAWRAYR QSLADGLSIR L
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