Gene Avin_06630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_06630 
Symbol 
ID7759617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp632786 
End bp634051 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content69% 
IMG OID643803585 
ProductABC efflux transporter, permease protein 
Protein accessionYP_002797889 
Protein GI226942816 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.949424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCTGT TGCGCCTGGC CCTGGCCAGT CTGGCCAACC GCCGCGCCAC CGCCCTGCTC 
ACGGTATTCG CCATCGCCGT CTCGGTCTGC CTGCTGCTCG CCGTCGAACG GGTGCGCACC
GAGGCCCGCG CCAGTTTCGC CAGCACCCTG AGCGGCACCG ACCTGATCGT CGGTGCCCGT
TCCGGCCCGG TGAATCTGTT GCTCTATTCG GTGTTCCGTA TCGGCAACGC CACCAACAAC
ATCCGCTGGG AGAGCTTCCG GCACTTCGCC GAGCATCCAC GGGTGAAATG GGCGATCCCG
CTGTCGCTCG GCGATTCGCA TCGCGGCTAC CGGGTGCTGG GCACCACGGT GGCCTACTTC
GAGCACTACC GCTACGGCCG CCGGCAGCCG CTGGAATTGA GGGAAGGCCG TGCCTTCGCC
ACGGACCCGT TCGAGGTGGT GCTCGGCGCC GAGGTGGCCG AGGCACTGCA CTACAAGCTG
GGCGACGAAC TCGTGCTGGC CCACGGCGTG GCCAGGATCA GCCTGACCCG CCACGAGGAC
AAGCCGTTCC GCGTGGTCGG CATCCTCGGC CGCACCGGCA CGCCGGTCGA TCGTACCCTG
CATATCGGCC TGACCGGCAT GGAAGCGCTG CACATCGACT GGCGCGGCGG CGTGCCGGCC
CGGGGCGGCG CGCGCATCGA CGCCGAGCAG GCGCGCCGGA TGGACCTGCA GCCCAAGGCG
ATCACCGCCT TCCTGCTCGG CCTCGACAGC CGGATCGCCA CTTTCGCCAT GCAGCGGGAA
ATCAACGACT ACCTCGGCGA GCCGCTGCTG GCGATCCTCC CCGGGGTCGC CCTGCAGGAG
CTGTGGAGCC TGATGGGCAC TGCGGAGCAG GCCTTGTTCG TGGTCTCGCT GTGCGTCGTG
CTGACCGGGC TGATCGGCAT GCTCACGGCG ATCCTCGCCA GCCTCAACGA ACGCCGCCGG
GAGATGGCGA TCCTCCGCTC GCTGGGCGCC CGGCCCTGGC ACATCGCCGG GCTGCTGGTG
CTGGAAGCCT TCGCGCTGGC CCTGGCCGGC GTGCTGCTCG GCCTGGCCCT GCTCTATCTC
GGCATCCTGC TGGCCCAGGG ACCGCTGCAG GCGGCCTACG GACTCTACTT GCCGTTCGCT
GCGCCGAGCA CCTATGAATG GCTGCTGCTC GGTGCCATTC TGGCTGCGTC GCTGCCGCTC
GGCGCGATAC CGGCCTGGCG CGCCTATCGC CAGTCGCTGG CCGACGGTCT GTCCATTCGC
CTGTGA
 
Protein sequence
MHLLRLALAS LANRRATALL TVFAIAVSVC LLLAVERVRT EARASFASTL SGTDLIVGAR 
SGPVNLLLYS VFRIGNATNN IRWESFRHFA EHPRVKWAIP LSLGDSHRGY RVLGTTVAYF
EHYRYGRRQP LELREGRAFA TDPFEVVLGA EVAEALHYKL GDELVLAHGV ARISLTRHED
KPFRVVGILG RTGTPVDRTL HIGLTGMEAL HIDWRGGVPA RGGARIDAEQ ARRMDLQPKA
ITAFLLGLDS RIATFAMQRE INDYLGEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLCVV
LTGLIGMLTA ILASLNERRR EMAILRSLGA RPWHIAGLLV LEAFALALAG VLLGLALLYL
GILLAQGPLQ AAYGLYLPFA APSTYEWLLL GAILAASLPL GAIPAWRAYR QSLADGLSIR
L