Gene Avin_05760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_05760 
Symbol 
ID7759532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp554242 
End bp554829 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID643803496 
ProductTranscriptional regulatory protein, TetR family 
Protein accessionYP_002797804 
Protein GI226942731 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.466087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGCG GACGCCCTCG TACCTTCGAT CCGGAACGGA TGCTCGAACA GGCCATGCAG 
ATGTTCTGGC GGCACGGCTA CGAAGCCACC TCGCTGCAGG ACCTGCTGAC GGCGACCGGC 
CTGTCGAAGA GCAGCCTGTA CCAGACCTAT CCGAGCAAGC GCGCCCTGTT CGCGGCGGCG 
CTGCGCCATT ACTGCGCCCA GCGCCGCCGC GAACTGCGCG AGCGCCTGCA GGCGGCCGTC 
TCGCCGCGCG AGTTCCTGCG CGGCTGGTTG TGTTGCGCCC TGGAGGAGGA GTGCGCCGGC 
GAGGCGCCGC GCGGCTGCAT GCTGGTCAAC GTGGCCAGCG AGTTTTCCCA GGCCGACGCG 
GAGATCGCCG CCTTGCTGCG CAGCGGGGTC GAGGGGCTGC GCCAGGTGCT GGTCGAGGCC 
CTGCGGCGCG CCCAGGATTG CGGCGAGCTG GATGCGGCGG CCGATGTGCA AGTGCTGGCC 
GGCTATCTGC AGTGCGTGAT GAACGGCCTG CGCACCCAGC GCAAGGCGGG AGCCTCGGTC 
GAGGCCCTGC GCGCGACGAT CGAGGTGGCC CTGGGGTGTC TGCGGTGA
 
Protein sequence
MTRGRPRTFD PERMLEQAMQ MFWRHGYEAT SLQDLLTATG LSKSSLYQTY PSKRALFAAA 
LRHYCAQRRR ELRERLQAAV SPREFLRGWL CCALEEECAG EAPRGCMLVN VASEFSQADA 
EIAALLRSGV EGLRQVLVEA LRRAQDCGEL DAAADVQVLA GYLQCVMNGL RTQRKAGASV 
EALRATIEVA LGCLR